Gene name: ZRT1
Reference locus (S288C): YGL255W
Gene biotype: protein_coding
Description: Solute carrier family 39 (zinc transporter), member 1/2/3; Zinc-regulated transporter 1; High-affinity zinc transporter of the plasma membrane; responsible for the majority of zinc uptake; transcription is induced under low-zinc conditions by the Zap1p transcription factor; Belongs to the ZIP transporter (TC 2.A.5) family
Top 10 interactors (score): ZRT2 (0.999); ZRT3 (0.991); YKE4 (0.983); ZPS1 (0.972); FET4 (0.969); ZRC1 (0.96); ZAP1 (0.96); MSC2 (0.92); COT1 (0.902); ZRG17 (0.899); ATX2 (0.827); FTR1 (0.825); SMF1 (0.81); FET3 (0.808); PHO84 (0.768); CSR1 (0.748); CTR3 (0.744); YOR387C (0.736); YPF1 (0.727); CTR2 (0.723)
Homologues (species, bitscore): ZIP5 (Arabidopsis thaliana, 136.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:22489-23619:+ | gene-YGL255W_AKU4011 | rna-NM_001181121.1_AKU4011 | cds-NP_011259.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000175.1:14532-15662:+ | gene-YGL255W_BG1 | rna-NM_001181121.1_BG1 | cds-NP_011259.1_BG1 | 96.4 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:22862-23986:+ | gene-YGL255W_Bruggeman | rna-NM_001181121.1_Bruggeman | cds-NP_011259.1_Bruggeman | 95.4 | 99.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:20920-22050:+ | gene-YGL255W_CAT1 | rna-NM_001181121.1_CAT1 | cds-NP_011259.1_CAT1 | 96.4 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:26777-27907:+ | gene-YGL255W_CBS1585 | rna-NM_001181121.1_CBS1585 | cds-NP_011259.1_CBS1585 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:21523-22647:+ | gene-YGL255W_CBS436 | rna-NM_001181121.1_CBS436 | cds-NP_011259.1_CBS436 | 95.1 | 99.4 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:14345-15475:+ | gene-YGL255W_CBS6412 | rna-NM_001181121.1_CBS6412 | cds-NP_011259.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:20633-21763:+ | gene-YGL255W_CBS6413 | rna-NM_001181121.1_CBS6413 | cds-NP_011259.1_CBS6413 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:20646-21770:+ | gene-YGL255W_CENPK1137D | rna-NM_001181121.1_CENPK1137D | cds-NP_011259.1_CENPK1137D | 95.6 | 99.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:13766-14896:+ | gene-YGL255W_EthanolRed | rna-NM_001181121.1_EthanolRed | cds-NP_011259.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:14127-15257:+ | gene-YGL255W_FaliES1 | rna-NM_001181121.1_FaliES1 | cds-NP_011259.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000079.1:51812-52936:- | gene-YGL255W_JAY291 | rna-NM_001181121.1_JAY291 | cds-NP_011259.1_JAY291 | 95.1 | 99.4 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:22798-23922:+ | gene-YGL255W_MUCL30387 | rna-NM_001181121.1_MUCL30387 | cds-NP_011259.1_MUCL30387 | 95.3 | 99.4 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | MBVW01000264.1:1-984:- | gene-YGL255W_MUCL30388 | rna-NM_001181121.1_MUCL30388 | cds-NP_011259.1_MUCL30388 | 87.0 | 87.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:23374-24504:+ | gene-YGL255W_MUCL39482 | rna-NM_001181121.1_MUCL39482 | cds-NP_011259.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:26285-27409:+ | gene-YGL255W_MUCL42920 | rna-NM_001181121.1_MUCL42920 | cds-NP_011259.1_MUCL42920 | 95.4 | 99.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:20978-22108:+ | gene-YGL255W_NCIM3186 | rna-NM_001181121.1_NCIM3186 | cds-NP_011259.1_NCIM3186 | 95.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:15138-16268:+ | gene-YGL255W_NCYC1407 | rna-NM_001181121.1_NCYC1407 | cds-NP_011259.1_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:17011-18135:+ | gene-YGL255W_PE2H3 | rna-NM_001181121.1_PE2H3 | cds-NP_011259.1_PE2H3 | 95.9 | 99.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:16559-17683:+ | gene-YGL255W_PE2H4 | rna-NM_001181121.1_PE2H4 | cds-NP_011259.1_PE2H4 | 95.9 | 99.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:20978-22108:+ | gene-YGL255W_S288C | rna-NM_001181121.1_S288C | cds-NP_011259.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000002.1:353236-354366:- | gene-YGL255W_SA1 | rna-NM_001181121.1_SA1 | cds-NP_011259.1_SA1 | 96.4 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:14442-15572:+ | gene-YGL255W_ThermosaccDry | rna-NM_001181121.1_ThermosaccDry | cds-NP_011259.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | MBVZ01000129.1:462-1592:+ | gene-YGL255W_VR1 | rna-NM_001181121.1_VR1 | cds-NP_011259.1_VR1 | 96.4 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:13516-14646:+ | gene-YGL255W_ZTW1 | rna-NM_001181121.1_ZTW1 | cds-NP_011259.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:22203-23321:+ | gene-YGL255W_Sparadoxus | rna-NM_001181121.1_Sparadoxus | cds-NP_011259.1_Sparadoxus | 88.4 | 98.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |