Gene name: ZPR1
Reference locus (S288C): YGR211W
Gene biotype: protein_coding
Description: Essential protein with two zinc fingers; present in nucleus of growing cells, relocates to cytoplasm in starved cells via a process mediated by Cpr1p; binds translation elongation factor eEF-1 (Tef1p); relative distribution to nucleus increases upon DNA replication stress; human ZPR1 gene can complement yeast by allowing growth during down-regulation of yeast zpr1
Top 10 interactors (score): TEF2 (0.957); YTM1 (0.901); TEF1 (0.891); YGR210C (0.88); STI1 (0.854); OXR1 (0.854); SVF1 (0.838); ZUO1 (0.801); XDJ1 (0.792); CPR6 (0.759); SCJ1 (0.717); LHS1 (0.71); NCE103 (0.705); CPR1 (0.693); KRE33 (0.676); NNR1 (0.672); SPC98 (0.664); BUD13 (0.663); UBA4 (0.662); HSP42 (0.657)
Homologues (species, bitscore): ZPR1 (Homo sapiens, 380.6); Zpr1 (Mus musculus, 387.5); znf259 (Danio rerio, 390.6); znf259 (Xenopus tropicalis, 364.8); Zpr1 (Drosophila melanogaster, 336.3); W03F9.1 (Caenorhabditis elegans, 319.3); AT5G22480 (Arabidopsis thaliana, 350.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:880760-882220:+ | gene-YGR211W_AKU4011 | rna-NM_001181340.3_AKU4011 | cds-NP_011727.3_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000021.1:161141-162601:+ | gene-YGR211W_BG1 | rna-NM_001181340.3_BG1 | cds-NP_011727.3_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:888959-890419:+ | gene-YGR211W_Bruggeman | rna-NM_001181340.3_Bruggeman | cds-NP_011727.3_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:886952-888412:+ | gene-YGR211W_CAT1 | rna-NM_001181340.3_CAT1 | cds-NP_011727.3_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:884198-885658:+ | gene-YGR211W_CBS1585 | rna-NM_001181340.3_CBS1585 | cds-NP_011727.3_CBS1585 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:887549-889009:+ | gene-YGR211W_CBS436 | rna-NM_001181340.3_CBS436 | cds-NP_011727.3_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:875070-876530:+ | gene-YGR211W_CBS6412 | rna-NM_001181340.3_CBS6412 | cds-NP_011727.3_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:881129-882589:+ | gene-YGR211W_CBS6413 | rna-NM_001181340.3_CBS6413 | cds-NP_011727.3_CBS6413 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:914951-916411:+ | gene-YGR211W_CENPK1137D | rna-NM_001181340.3_CENPK1137D | cds-NP_011727.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:869579-871039:+ | gene-YGR211W_EthanolRed | rna-NM_001181340.3_EthanolRed | cds-NP_011727.3_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:873970-875430:+ | gene-YGR211W_FaliES1 | rna-NM_001181340.3_FaliES1 | cds-NP_011727.3_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000148.1:31694-33154:+ | gene-YGR211W_JAY291 | rna-NM_001181340.3_JAY291 | cds-NP_011727.3_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:886443-887903:+ | gene-YGR211W_MUCL30387 | rna-NM_001181340.3_MUCL30387 | cds-NP_011727.3_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:886127-887587:+ | gene-YGR211W_MUCL30388 | rna-NM_001181340.3_MUCL30388 | cds-NP_011727.3_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:879274-880734:+ | gene-YGR211W_MUCL39482 | rna-NM_001181340.3_MUCL39482 | cds-NP_011727.3_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:896820-898280:+ | gene-YGR211W_MUCL42920 | rna-NM_001181340.3_MUCL42920 | cds-NP_011727.3_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:915241-916701:+ | gene-YGR211W_NCIM3186 | rna-NM_001181340.3_NCIM3186 | cds-NP_011727.3_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:874930-876390:+ | gene-YGR211W_NCYC1407 | rna-NM_001181340.3_NCYC1407 | cds-NP_011727.3_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:899536-900996:+ | gene-YGR211W_PE2H3 | rna-NM_001181340.3_PE2H3 | cds-NP_011727.3_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:904646-906106:+ | gene-YGR211W_PE2H4 | rna-NM_001181340.3_PE2H4 | cds-NP_011727.3_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:915241-916701:+ | gene-YGR211W_S288C | rna-NM_001181340.3_S288C | cds-NP_011727.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000045.1:84690-86150:- | gene-YGR211W_SA1 | rna-NM_001181340.3_SA1 | cds-NP_011727.3_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:894481-895941:+ | gene-YGR211W_ThermosaccDry | rna-NM_001181340.3_ThermosaccDry | cds-NP_011727.3_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:998964-1000424:+ | gene-YGR211W_VR1 | rna-NM_001181340.3_VR1 | cds-NP_011727.3_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000016.1:195922-197382:+ | gene-YGR211W_ZTW1 | rna-NM_001181340.3_ZTW1 | cds-NP_011727.3_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:886411-887871:+ | gene-YGR211W_Sparadoxus | rna-NM_001181340.3_Sparadoxus | cds-NP_011727.3_Sparadoxus | 91.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |