Gene name: ZIP2
Reference locus (S288C): YGL249W
Gene biotype: protein_coding
Description: Meiosis-specific protein; involved in normal synaptonemal complex formation and pairing between homologous chromosomes during meiosis; relocalizes from mitochondrion to cytoplasm upon DNA replication stress; Belongs to the ZIP2 family
Top 10 interactors (score): SPO16 (0.995); SPO22 (0.965); ZIP1 (0.941); CST9 (0.941); MSH4 (0.867); RED1 (0.863); DMC1 (0.852); HOP1 (0.842); PCH2 (0.84); MSH5 (0.813); HOP2 (0.79); DOT1 (0.784); SAE2 (0.782); MND1 (0.782); ECM11 (0.78); GMC2 (0.779); HFM1 (0.777); SPO74 (0.745); MLH2 (0.718); IME4 (0.716)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:34623-36737:+ | gene-YGL249W_AKU4011 | rna-NM_001181115.1_AKU4011 | cds-NP_011265.1_AKU4011 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000175.1:26662-28776:+ | gene-YGL249W_BG1 | rna-NM_001181115.1_BG1 | cds-NP_011265.1_BG1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:34978-37092:+ | gene-YGL249W_Bruggeman | rna-NM_001181115.1_Bruggeman | cds-NP_011265.1_Bruggeman | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:33050-35164:+ | gene-YGL249W_CAT1 | rna-NM_001181115.1_CAT1 | cds-NP_011265.1_CAT1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:38911-41025:+ | gene-YGL249W_CBS1585 | rna-NM_001181115.1_CBS1585 | cds-NP_011265.1_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:33639-35753:+ | gene-YGL249W_CBS436 | rna-NM_001181115.1_CBS436 | cds-NP_011265.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:26479-28593:+ | gene-YGL249W_CBS6412 | rna-NM_001181115.1_CBS6412 | cds-NP_011265.1_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:32767-34881:+ | gene-YGL249W_CBS6413 | rna-NM_001181115.1_CBS6413 | cds-NP_011265.1_CBS6413 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:32760-34874:+ | gene-YGL249W_CENPK1137D | rna-NM_001181115.1_CENPK1137D | cds-NP_011265.1_CENPK1137D | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:25900-28014:+ | gene-YGL249W_EthanolRed | rna-NM_001181115.1_EthanolRed | cds-NP_011265.1_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:26261-28375:+ | gene-YGL249W_FaliES1 | rna-NM_001181115.1_FaliES1 | cds-NP_011265.1_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000079.1:38706-40820:- | gene-YGL249W_JAY291 | rna-NM_001181115.1_JAY291 | cds-NP_011265.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:34915-37029:+ | gene-YGL249W_MUCL30387 | rna-NM_001181115.1_MUCL30387 | cds-NP_011265.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:37068-39182:+ | gene-YGL249W_MUCL30388 | rna-NM_001181115.1_MUCL30388 | cds-NP_011265.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:35508-37622:+ | gene-YGL249W_MUCL39482 | rna-NM_001181115.1_MUCL39482 | cds-NP_011265.1_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:38401-40515:+ | gene-YGL249W_MUCL42920 | rna-NM_001181115.1_MUCL42920 | cds-NP_011265.1_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:33098-35212:+ | gene-YGL249W_NCIM3186 | rna-NM_001181115.1_NCIM3186 | cds-NP_011265.1_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:27272-29386:+ | gene-YGL249W_NCYC1407 | rna-NM_001181115.1_NCYC1407 | cds-NP_011265.1_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:29128-31242:+ | gene-YGL249W_PE2H3 | rna-NM_001181115.1_PE2H3 | cds-NP_011265.1_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:28676-30790:+ | gene-YGL249W_PE2H4 | rna-NM_001181115.1_PE2H4 | cds-NP_011265.1_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:33098-35212:+ | gene-YGL249W_S288C | rna-NM_001181115.1_S288C | cds-NP_011265.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000002.1:340122-342236:- | gene-YGL249W_SA1 | rna-NM_001181115.1_SA1 | cds-NP_011265.1_SA1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:26576-28690:+ | gene-YGL249W_ThermosaccDry | rna-NM_001181115.1_ThermosaccDry | cds-NP_011265.1_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:33565-35679:+ | gene-YGL249W_VR1 | rna-NM_001181115.1_VR1 | cds-NP_011265.1_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:25650-27763:+ | gene-YGL249W_ZTW1 | rna-NM_001181115.1_ZTW1 | cds-NP_011265.1_ZTW1 | 99.0 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:34321-36433:+ | gene-YGL249W_Sparadoxus | rna-NM_001181115.1_Sparadoxus | cds-NP_011265.1_Sparadoxus | 83.8 | 99.5 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |