Gene name: ZAP1
Reference locus (S288C): YJL056C
Gene biotype: protein_coding
Description: Zinc-responsive transcriptional regulator ZAP1; Zinc-regulated transcription factor; binds to zinc-responsive promoters to induce transcription of certain genes in presence of zinc, represses other genes in low zinc; regulates its own transcription; contains seven zinc-finger domains
Top 10 interactors (score): ZRT1 (0.96); IZH1 (0.92); IZH2 (0.92); IZH4 (0.92); ZRT2 (0.919); ZRT3 (0.916); IZH3 (0.915); YKE4 (0.913); ZRC1 (0.898); ZPS1 (0.864); URA10 (0.859); URA5 (0.854); FET4 (0.847); MSC2 (0.784); OPI1 (0.78); RTC4 (0.779); ZRG17 (0.768); CSR1 (0.76); COT1 (0.754); YOR387C (0.749)
Homologues (species, bitscore): ZNF778 (Homo sapiens, 140.6); Zscan22 (Mus musculus, 136.3); zgc:113100 (Danio rerio, 133.3); ENSXETP00000058353 (Xenopus tropicalis, 133.7); gl (Drosophila melanogaster, 127.9); che-1 (Caenorhabditis elegans, 109.4); REF6 (Arabidopsis thaliana, 60.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:313294-315888:- | gene-YJL056C_AKU4011 | rna-NM_001181489.1_AKU4011 | cds-NP_012479.1_AKU4011 | 97.2 | 98.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:297907-300549:+ | gene-YJL056C_BG1 | rna-NM_001181489.1_BG1 | cds-NP_012479.1_BG1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:325829-328471:- | gene-YJL056C_Bruggeman | rna-NM_001181489.1_Bruggeman | cds-NP_012479.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:329940-332534:- | gene-YJL056C_CAT1 | rna-NM_001181489.1_CAT1 | cds-NP_012479.1_CAT1 | 97.2 | 98.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:324948-327542:- | gene-YJL056C_CBS1585 | rna-NM_001181489.1_CBS1585 | cds-NP_012479.1_CBS1585 | 97.3 | 98.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:342956-345598:- | gene-YJL056C_CBS436 | rna-NM_001181489.1_CBS436 | cds-NP_012479.1_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:314052-316646:- | gene-YJL056C_CBS6412 | rna-NM_001181489.1_CBS6412 | cds-NP_012479.1_CBS6412 | 97.3 | 98.1 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:315399-317993:- | gene-YJL056C_CBS6413 | rna-NM_001181489.1_CBS6413 | cds-NP_012479.1_CBS6413 | 97.2 | 98.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:312899-315541:- | gene-YJL056C_CENPK1137D | rna-NM_001181489.1_CENPK1137D | cds-NP_012479.1_CENPK1137D | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:317131-319725:- | gene-YJL056C_EthanolRed | rna-NM_001181489.1_EthanolRed | cds-NP_012479.1_EthanolRed | 97.3 | 98.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:328706-331300:- | gene-YJL056C_FaliES1 | rna-NM_001181489.1_FaliES1 | cds-NP_012479.1_FaliES1 | 97.3 | 98.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000138.1:126296-128938:- | gene-YJL056C_JAY291 | rna-NM_001181489.1_JAY291 | cds-NP_012479.1_JAY291 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:326984-329626:- | gene-YJL056C_MUCL30387 | rna-NM_001181489.1_MUCL30387 | cds-NP_012479.1_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:323022-325664:- | gene-YJL056C_MUCL30388 | rna-NM_001181489.1_MUCL30388 | cds-NP_012479.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:317702-320296:- | gene-YJL056C_MUCL39482 | rna-NM_001181489.1_MUCL39482 | cds-NP_012479.1_MUCL39482 | 97.3 | 98.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:324349-326991:- | gene-YJL056C_MUCL42920 | rna-NM_001181489.1_MUCL42920 | cds-NP_012479.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:330410-333052:- | gene-YJL056C_NCIM3186 | rna-NM_001181489.1_NCIM3186 | cds-NP_012479.1_NCIM3186 | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:316398-318992:- | gene-YJL056C_NCYC1407 | rna-NM_001181489.1_NCYC1407 | cds-NP_012479.1_NCYC1407 | 97.2 | 98.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:328750-331392:- | gene-YJL056C_PE2H3 | rna-NM_001181489.1_PE2H3 | cds-NP_012479.1_PE2H3 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:328395-331037:- | gene-YJL056C_PE2H4 | rna-NM_001181489.1_PE2H4 | cds-NP_012479.1_PE2H4 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:330431-333073:- | gene-YJL056C_S288C | rna-NM_001181489.1_S288C | cds-NP_012479.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000003.1:126313-128955:- | gene-YJL056C_SA1 | rna-NM_001181489.1_SA1 | cds-NP_012479.1_SA1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:322119-324713:- | gene-YJL056C_ThermosaccDry | rna-NM_001181489.1_ThermosaccDry | cds-NP_012479.1_ThermosaccDry | 97.3 | 98.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:324312-326930:- | gene-YJL056C_VR1 | rna-NM_001181489.1_VR1 | cds-NP_012479.1_VR1 | 96.0 | 98.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:303496-306090:- | gene-YJL056C_ZTW1 | rna-NM_001181489.1_ZTW1 | cds-NP_012479.1_ZTW1 | 97.3 | 98.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:327515-330166:- | gene-YJL056C_Sparadoxus | rna-NM_001181489.1_Sparadoxus | cds-NP_012479.1_Sparadoxus | 88.2 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |