Gene name: YVH1
Reference locus (S288C): YIR026C
Gene biotype: protein_coding
Description: Tyrosine-protein phosphatase YVH1; Dual specificity protein phosphatase; regulates growth, sporulation, and glycogen accumulation in a cAMP-dependent protein kinase cascade dependent manner; mutants are defective in 60S ribosome assembly; positively regulates pre-autophagosomal structure (PAS) formation upon nitrogen starvation or rapamycin treatment
Top 10 interactors (score): TIF6 (0.999); NMD3 (0.999); MRT4 (0.999); ARX1 (0.999); NUG1 (0.998); LSG1 (0.998); REI1 (0.998); NSA2 (0.997); RLP24 (0.997); NOG1 (0.996); RPL3 (0.99); RPL7A (0.988); NOP7 (0.988); BUD20 (0.987); RPL35A (0.987); NOG2 (0.986); RPL25 (0.986); RPL35B (0.985); YTM1 (0.983); MEX67 (0.983)
Homologues (species, bitscore): DUSP12 (Homo sapiens, 145.6); Dusp12 (Mus musculus, 154.8); dusp12 (Danio rerio, 173.3); dusp12 (Xenopus tropicalis, 157.9); MKP-4 (Drosophila melanogaster, 122.5); C24F3.2 (Caenorhabditis elegans, 66.2); AT4G18593 (Arabidopsis thaliana, 89.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:403100-404194:- | gene-YIR026C_AKU4011 | rna-NM_001179548.3_AKU4011 | cds-NP_012292.3_AKU4011 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000072.1:22716-23810:+ | gene-YIR026C_BG1 | rna-NM_001179548.3_BG1 | cds-NP_012292.3_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:408950-410044:- | gene-YIR026C_Bruggeman | rna-NM_001179548.3_Bruggeman | cds-NP_012292.3_Bruggeman | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:394218-395312:- | gene-YIR026C_CAT1 | rna-NM_001179548.3_CAT1 | cds-NP_012292.3_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:404053-405147:- | gene-YIR026C_CBS1585 | rna-NM_001179548.3_CBS1585 | cds-NP_012292.3_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005351.1:396021-397115:- | gene-YIR026C_CBS436 | rna-NM_001179548.3_CBS436 | cds-NP_012292.3_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005327.1:102559-103653:- | gene-YIR026C_CBS6412 | rna-NM_001179548.3_CBS6412 | cds-NP_012292.3_CBS6412 | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:395154-396248:- | gene-YIR026C_CBS6413 | rna-NM_001179548.3_CBS6413 | cds-NP_012292.3_CBS6413 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:396534-397628:- | gene-YIR026C_CENPK1137D | rna-NM_001179548.3_CENPK1137D | cds-NP_012292.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005479.1:386017-387111:- | gene-YIR026C_EthanolRed | rna-NM_001179548.3_EthanolRed | cds-NP_012292.3_EthanolRed | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:405845-406939:- | gene-YIR026C_FaliES1 | rna-NM_001179548.3_FaliES1 | cds-NP_012292.3_FaliES1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000039.1:27225-28319:+ | gene-YIR026C_JAY291 | rna-NM_001179548.3_JAY291 | cds-NP_012292.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:410051-411145:- | gene-YIR026C_MUCL30387 | rna-NM_001179548.3_MUCL30387 | cds-NP_012292.3_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005447.1:404669-405763:- | gene-YIR026C_MUCL30388 | rna-NM_001179548.3_MUCL30388 | cds-NP_012292.3_MUCL30388 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:404200-405294:- | gene-YIR026C_MUCL39482 | rna-NM_001179548.3_MUCL39482 | cds-NP_012292.3_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:410513-411607:- | gene-YIR026C_MUCL42920 | rna-NM_001179548.3_MUCL42920 | cds-NP_012292.3_MUCL42920 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:404873-405967:- | gene-YIR026C_NCIM3186 | rna-NM_001179548.3_NCIM3186 | cds-NP_012292.3_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005271.1:407964-409058:- | gene-YIR026C_NCYC1407 | rna-NM_001179548.3_NCYC1407 | cds-NP_012292.3_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:398813-399907:- | gene-YIR026C_PE2H3 | rna-NM_001179548.3_PE2H3 | cds-NP_012292.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:393519-394613:- | gene-YIR026C_PE2H4 | rna-NM_001179548.3_PE2H4 | cds-NP_012292.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:404873-405967:- | gene-YIR026C_S288C | rna-NM_001179548.3_S288C | cds-NP_012292.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000097.1:22884-23978:+ | gene-YIR026C_SA1 | rna-NM_001179548.3_SA1 | cds-NP_012292.3_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:402710-403804:- | gene-YIR026C_ThermosaccDry | rna-NM_001179548.3_ThermosaccDry | cds-NP_012292.3_ThermosaccDry | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:400043-401137:- | gene-YIR026C_VR1 | rna-NM_001179548.3_VR1 | cds-NP_012292.3_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000020.1:11876-12970:- | gene-YIR026C_ZTW1 | rna-NM_001179548.3_ZTW1 | cds-NP_012292.3_ZTW1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:400407-401501:- | gene-YIR026C_Sparadoxus | rna-NM_001179548.3_Sparadoxus | cds-NP_012292.3_Sparadoxus | 91.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |