Gene name: YUH1
Reference locus (S288C): YJR099W
Gene biotype: protein_coding
Description: Ubiquitin C-terminal hydrolase; cleaves ubiquitin-protein fusions to generate monomeric ubiquitin; hydrolyzes the peptide bond at the C-terminus of ubiquitin; also the major processing enzyme for the ubiquitin-like protein Rub1p; Belongs to the peptidase C12 family
Top 10 interactors (score): UBI4 (0.998); RPS31 (0.997); RUB1 (0.99); RPL40B (0.978); UBA1 (0.97); RPL40A (0.969); RPN11 (0.96); UBP6 (0.949); RRI1 (0.929); OTU2 (0.917); UBP14 (0.915); UBP2 (0.906); UBA3 (0.906); UBP1 (0.886); ULA1 (0.846); UBP3 (0.831); UBP15 (0.826); RPT1 (0.798); RPN8 (0.782); RPN1 (0.769)
Homologues (species, bitscore): UCHL3 (Homo sapiens, 117.9); Uchl3 (Mus musculus, 119.4); uchl3 (Danio rerio, 114.0); uchl3 (Xenopus tropicalis, 116.3); Uch (Drosophila melanogaster, 96.3); ubh-2 (Caenorhabditis elegans, 71.2); UCH3 (Arabidopsis thaliana, 90.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:587074-587784:+ | gene-YJR099W_AKU4011 | rna-NM_001181757.1_AKU4011 | cds-NP_012633.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:19788-20498:- | gene-YJR099W_BG1 | rna-NM_001181757.1_BG1 | cds-NP_012633.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:602807-603517:+ | gene-YJR099W_Bruggeman | rna-NM_001181757.1_Bruggeman | cds-NP_012633.1_Bruggeman | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:605226-605936:+ | gene-YJR099W_CAT1 | rna-NM_001181757.1_CAT1 | cds-NP_012633.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:599139-599849:+ | gene-YJR099W_CBS1585 | rna-NM_001181757.1_CBS1585 | cds-NP_012633.1_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:617246-617956:+ | gene-YJR099W_CBS436 | rna-NM_001181757.1_CBS436 | cds-NP_012633.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:586286-586996:+ | gene-YJR099W_CBS6412 | rna-NM_001181757.1_CBS6412 | cds-NP_012633.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:588547-589257:+ | gene-YJR099W_CBS6413 | rna-NM_001181757.1_CBS6413 | cds-NP_012633.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:597892-598602:+ | gene-YJR099W_CENPK1137D | rna-NM_001181757.1_CENPK1137D | cds-NP_012633.1_CENPK1137D | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:591491-592201:+ | gene-YJR099W_EthanolRed | rna-NM_001181757.1_EthanolRed | cds-NP_012633.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:602957-603667:+ | gene-YJR099W_FaliES1 | rna-NM_001181757.1_FaliES1 | cds-NP_012633.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000054.1:85750-86460:- | gene-YJR099W_JAY291 | rna-NM_001181757.1_JAY291 | cds-NP_012633.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:601111-601821:+ | gene-YJR099W_MUCL30387 | rna-NM_001181757.1_MUCL30387 | cds-NP_012633.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:598423-599133:+ | gene-YJR099W_MUCL30388 | rna-NM_001181757.1_MUCL30388 | cds-NP_012633.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:592598-593308:+ | gene-YJR099W_MUCL39482 | rna-NM_001181757.1_MUCL39482 | cds-NP_012633.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:596853-597563:+ | gene-YJR099W_MUCL42920 | rna-NM_001181757.1_MUCL42920 | cds-NP_012633.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:615555-616265:+ | gene-YJR099W_NCIM3186 | rna-NM_001181757.1_NCIM3186 | cds-NP_012633.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:590165-590875:+ | gene-YJR099W_NCYC1407 | rna-NM_001181757.1_NCYC1407 | cds-NP_012633.1_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:608058-608768:+ | gene-YJR099W_PE2H3 | rna-NM_001181757.1_PE2H3 | cds-NP_012633.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:601747-602457:+ | gene-YJR099W_PE2H4 | rna-NM_001181757.1_PE2H4 | cds-NP_012633.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:615576-616286:+ | gene-YJR099W_S288C | rna-NM_001181757.1_S288C | cds-NP_012633.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000038.1:74146-74856:+ | gene-YJR099W_SA1 | rna-NM_001181757.1_SA1 | cds-NP_012633.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:596891-597601:+ | gene-YJR099W_ThermosaccDry | rna-NM_001181757.1_ThermosaccDry | cds-NP_012633.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:599018-599728:+ | gene-YJR099W_VR1 | rna-NM_001181757.1_VR1 | cds-NP_012633.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:576258-576968:+ | gene-YJR099W_ZTW1 | rna-NM_001181757.1_ZTW1 | cds-NP_012633.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:609744-610454:+ | gene-YJR099W_Sparadoxus | rna-NM_001181757.1_Sparadoxus | cds-NP_012633.1_Sparadoxus | 85.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |