Gene name: YTA7
Reference locus (S288C): YGR270W
Gene biotype: protein_coding
Description: Tat-binding homolog 7; Protein that localizes to chromatin; has a role in regulation of histone gene expression; has a bromodomain-like region that interacts with the N-terminal tail of histone H3, and an ATPase domain; relocalizes to the cytosol in response to hypoxia; potentially phosphorylated by Cdc28p
Top 10 interactors (score): MOT1 (0.943); SPT16 (0.941); HHT1 (0.916); ASF1 (0.914); RTT106 (0.909); RAD9 (0.905); POB3 (0.904); TAF1 (0.9); HHF1 (0.871); SAS3 (0.839); ITC1 (0.837); HTA1 (0.829); HHT2 (0.821); HTZ1 (0.813); ISW1 (0.809); PDP3 (0.796); INO80 (0.759); SPT21 (0.759); RSC6 (0.758); MCM3 (0.747)
Homologues (species, bitscore): ATAD2B (Homo sapiens, 481.5); Atad2b (Mus musculus, 483.4); atad2b (Danio rerio, 485.0); atad2 (Xenopus tropicalis, 466.5); TER94 (Drosophila melanogaster, 233.8); lex-1 (Caenorhabditis elegans, 417.9); AT1G05910 (Arabidopsis thaliana, 475.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:992802-996938:+ | gene-YGR270W_AKU4011 | rna-NM_001181399.1_AKU4011 | cds-NP_011786.1_AKU4011 | 99.1 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000021.1:272805-276944:+ | gene-YGR270W_BG1 | rna-NM_001181399.1_BG1 | cds-NP_011786.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:1001320-1005459:+ | gene-YGR270W_Bruggeman | rna-NM_001181399.1_Bruggeman | cds-NP_011786.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:1000510-1004895:+ | gene-YGR270W_CAT1 | rna-NM_001181399.1_CAT1 | cds-NP_011786.1_CAT1 | 93.7 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:995672-999808:+ | gene-YGR270W_CBS1585 | rna-NM_001181399.1_CBS1585 | cds-NP_011786.1_CBS1585 | 99.1 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:999297-1003436:+ | gene-YGR270W_CBS436 | rna-NM_001181399.1_CBS436 | cds-NP_011786.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:986562-990698:+ | gene-YGR270W_CBS6412 | rna-NM_001181399.1_CBS6412 | cds-NP_011786.1_CBS6412 | 99.1 | 99.9 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:992617-996753:+ | gene-YGR270W_CBS6413 | rna-NM_001181399.1_CBS6413 | cds-NP_011786.1_CBS6413 | 99.1 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:1027040-1031179:+ | gene-YGR270W_CENPK1137D | rna-NM_001181399.1_CENPK1137D | cds-NP_011786.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:980651-984787:+ | gene-YGR270W_EthanolRed | rna-NM_001181399.1_EthanolRed | cds-NP_011786.1_EthanolRed | 99.1 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:985457-989593:+ | gene-YGR270W_FaliES1 | rna-NM_001181399.1_FaliES1 | cds-NP_011786.1_FaliES1 | 99.1 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000076.1:40720-44859:- | gene-YGR270W_JAY291 | rna-NM_001181399.1_JAY291 | cds-NP_011786.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:999061-1003200:+ | gene-YGR270W_MUCL30387 | rna-NM_001181399.1_MUCL30387 | cds-NP_011786.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:997193-1001332:+ | gene-YGR270W_MUCL30388 | rna-NM_001181399.1_MUCL30388 | cds-NP_011786.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:990778-994914:+ | gene-YGR270W_MUCL39482 | rna-NM_001181399.1_MUCL39482 | cds-NP_011786.1_MUCL39482 | 99.1 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:1008646-1012785:+ | gene-YGR270W_MUCL42920 | rna-NM_001181399.1_MUCL42920 | cds-NP_011786.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:1027370-1031509:+ | gene-YGR270W_NCIM3186 | rna-NM_001181399.1_NCIM3186 | cds-NP_011786.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:986407-990543:+ | gene-YGR270W_NCYC1407 | rna-NM_001181399.1_NCYC1407 | cds-NP_011786.1_NCYC1407 | 99.1 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:1011597-1015736:+ | gene-YGR270W_PE2H3 | rna-NM_001181399.1_PE2H3 | cds-NP_011786.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:1016436-1020575:+ | gene-YGR270W_PE2H4 | rna-NM_001181399.1_PE2H4 | cds-NP_011786.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:1027370-1031509:+ | gene-YGR270W_S288C | rna-NM_001181399.1_S288C | cds-NP_011786.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000063.1:25588-29727:+ | gene-YGR270W_SA1 | rna-NM_001181399.1_SA1 | cds-NP_011786.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:1005977-1010113:+ | gene-YGR270W_ThermosaccDry | rna-NM_001181399.1_ThermosaccDry | cds-NP_011786.1_ThermosaccDry | 99.1 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:1111757-1115896:+ | gene-YGR270W_VR1 | rna-NM_001181399.1_VR1 | cds-NP_011786.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000016.1:307388-311524:+ | gene-YGR270W_ZTW1 | rna-NM_001181399.1_ZTW1 | cds-NP_011786.1_ZTW1 | 99.2 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:998015-1002184:+ | gene-YGR270W_Sparadoxus | rna-NM_001181399.1_Sparadoxus | cds-NP_011786.1_Sparadoxus | 86.8 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |