Gene name: YTA6
Reference locus (S288C): YPL074W
Gene biotype: protein_coding
Description: Probable 26S proteasome subunit YTA6; Putative ATPase of the CDC48/PAS1/SEC18 (AAA) family; localized to the cortex of mother cells but not to daughter cells; relocalizes from cytoplasm to plasma membrane foci upon DNA replication stress
Top 10 interactors (score): CMR2 (0.771); SVF1 (0.759); SMY1 (0.739); IST1 (0.72); BET2 (0.709); ERD2 (0.702); GPN3 (0.696); DID2 (0.66); DID4 (0.636); TCB2 (0.621); MDS3 (0.619); MPH1 (0.609); FPK1 (0.607); TCB1 (0.575); MSH4 (0.568); TCB3 (0.565); UFD4 (0.564); YND1 (0.562); SCS7 (0.549); LNP1 (0.542)
Homologues (species, bitscore): SPAST (Homo sapiens, 311.2); Fignl1 (Mus musculus, 314.3); spast (Danio rerio, 309.7); spast (Xenopus tropicalis, 304.7); spas (Drosophila melanogaster, 304.7); figl-1 (Caenorhabditis elegans, 305.8); AT3G27120 (Arabidopsis thaliana, 291.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:393484-395748:+ | gene-YPL074W_AKU4011 | rna-NM_001183888.1_AKU4011 | cds-NP_015251.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:599165-601429:+ | gene-YPL074W_BG1 | rna-NM_001183888.1_BG1 | cds-NP_015251.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:469812-472076:+ | gene-YPL074W_Bruggeman | rna-NM_001183888.1_Bruggeman | cds-NP_015251.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:510172-512436:+ | gene-YPL074W_CAT1 | rna-NM_001183888.1_CAT1 | cds-NP_015251.1_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:397557-399821:+ | gene-YPL074W_CBS1585 | rna-NM_001183888.1_CBS1585 | cds-NP_015251.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:412116-414380:+ | gene-YPL074W_CBS436 | rna-NM_001183888.1_CBS436 | cds-NP_015251.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:401746-404010:+ | gene-YPL074W_CBS6412 | rna-NM_001183888.1_CBS6412 | cds-NP_015251.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:394109-396373:+ | gene-YPL074W_CBS6413 | rna-NM_001183888.1_CBS6413 | cds-NP_015251.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:415732-417996:+ | gene-YPL074W_CENPK1137D | rna-NM_001183888.1_CENPK1137D | cds-NP_015251.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:391851-394115:+ | gene-YPL074W_EthanolRed | rna-NM_001183888.1_EthanolRed | cds-NP_015251.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:399681-401945:+ | gene-YPL074W_FaliES1 | rna-NM_001183888.1_FaliES1 | cds-NP_015251.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000283.1:8284-10548:+ | gene-YPL074W_JAY291 | rna-NM_001183888.1_JAY291 | cds-NP_015251.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:410642-412906:+ | gene-YPL074W_MUCL30387 | rna-NM_001183888.1_MUCL30387 | cds-NP_015251.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:409729-411993:+ | gene-YPL074W_MUCL30388 | rna-NM_001183888.1_MUCL30388 | cds-NP_015251.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:390886-393150:+ | gene-YPL074W_MUCL39482 | rna-NM_001183888.1_MUCL39482 | cds-NP_015251.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:448750-451014:+ | gene-YPL074W_MUCL42920 | rna-NM_001183888.1_MUCL42920 | cds-NP_015251.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:415746-418010:+ | gene-YPL074W_NCIM3186 | rna-NM_001183888.1_NCIM3186 | cds-NP_015251.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:397493-399757:+ | gene-YPL074W_NCYC1407 | rna-NM_001183888.1_NCYC1407 | cds-NP_015251.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:404776-407040:+ | gene-YPL074W_PE2H3 | rna-NM_001183888.1_PE2H3 | cds-NP_015251.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:404399-406663:+ | gene-YPL074W_PE2H4 | rna-NM_001183888.1_PE2H4 | cds-NP_015251.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:415763-418027:+ | gene-YPL074W_S288C | rna-NM_001183888.1_S288C | cds-NP_015251.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000057.1:37874-40138:+ | gene-YPL074W_SA1 | rna-NM_001183888.1_SA1 | cds-NP_015251.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:399481-401745:+ | gene-YPL074W_ThermosaccDry | rna-NM_001183888.1_ThermosaccDry | cds-NP_015251.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:414485-416749:+ | gene-YPL074W_VR1 | rna-NM_001183888.1_VR1 | cds-NP_015251.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:398791-401055:+ | gene-YPL074W_ZTW1 | rna-NM_001183888.1_ZTW1 | cds-NP_015251.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:400501-402768:+ | gene-YPL074W_Sparadoxus | rna-NM_001183888.1_Sparadoxus | cds-NP_015251.1_Sparadoxus | 90.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |