Gene name: YSW1
Reference locus (S288C): YBR148W
Gene biotype: protein_coding
Description: Spore-specific protein YSW1; Protein required for normal prospore membrane formation; interacts with Gip1p, which is the meiosis-specific regulatory subunit of the Glc7p protein phosphatase; expressed specifically in spores and localizes to the prospore membrane; YSW1 has a paralog, SPO21, that arose from the whole genome duplication
Top 10 interactors (score): SPR28 (0.921); SPR3 (0.916); CDC10 (0.907); CDC11 (0.904); CDC12 (0.904); CDC3 (0.9); GIP1 (0.885); RPR2 (0.748); RPP1 (0.745); PHM7 (0.745); POP5 (0.717); POP4 (0.712); PMP2 (0.698); YML020W (0.674); SPR6 (0.671); LIH1 (0.614); SPO20 (0.583); NUG1 (0.495); AMN1 (0.489); SPO73 (0.481)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:520801-522630:+ | gene-YBR148W_AKU4011 | rna-NM_001178496.3_AKU4011 | cds-NP_009706.3_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:511366-513195:+ | gene-YBR148W_BG1 | rna-NM_001178496.3_BG1 | cds-NP_009706.3_BG1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:523592-525420:+ | gene-YBR148W_Bruggeman | rna-NM_001178496.3_Bruggeman | cds-NP_009706.3_Bruggeman | 98.9 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:417939-419768:+ | gene-YBR148W_CAT1 | rna-NM_001178496.3_CAT1 | cds-NP_009706.3_CAT1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:512580-514409:+ | gene-YBR148W_CBS1585 | rna-NM_001178496.3_CBS1585 | cds-NP_009706.3_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:520677-522506:+ | gene-YBR148W_CBS436 | rna-NM_001178496.3_CBS436 | cds-NP_009706.3_CBS436 | 98.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:610446-612275:+ | gene-YBR148W_CBS6412 | rna-NM_001178496.3_CBS6412 | cds-NP_009706.3_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:518215-520044:+ | gene-YBR148W_CBS6413 | rna-NM_001178496.3_CBS6413 | cds-NP_009706.3_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:531645-533473:+ | gene-YBR148W_CENPK1137D | rna-NM_001178496.3_CENPK1137D | cds-NP_009706.3_CENPK1137D | 99.9 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:646821-648650:+ | gene-YBR148W_EthanolRed | rna-NM_001178496.3_EthanolRed | cds-NP_009706.3_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:536833-538662:+ | gene-YBR148W_FaliES1 | rna-NM_001178496.3_FaliES1 | cds-NP_009706.3_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000444.1:60277-62106:+ | gene-YBR148W_JAY291 | rna-NM_001178496.3_JAY291 | cds-NP_009706.3_JAY291 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:525462-527290:+ | gene-YBR148W_MUCL30387 | rna-NM_001178496.3_MUCL30387 | cds-NP_009706.3_MUCL30387 | 99.0 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:524755-526583:+ | gene-YBR148W_MUCL30388 | rna-NM_001178496.3_MUCL30388 | cds-NP_009706.3_MUCL30388 | 98.7 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:510967-512796:+ | gene-YBR148W_MUCL39482 | rna-NM_001178496.3_MUCL39482 | cds-NP_009706.3_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:520862-522690:+ | gene-YBR148W_MUCL42920 | rna-NM_001178496.3_MUCL42920 | cds-NP_009706.3_MUCL42920 | 98.7 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:537673-539502:+ | gene-YBR148W_NCIM3186 | rna-NM_001178496.3_NCIM3186 | cds-NP_009706.3_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:513508-515337:+ | gene-YBR148W_NCYC1407 | rna-NM_001178496.3_NCYC1407 | cds-NP_009706.3_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:526124-527953:+ | gene-YBR148W_PE2H3 | rna-NM_001178496.3_PE2H3 | cds-NP_009706.3_PE2H3 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:523800-525629:+ | gene-YBR148W_PE2H4 | rna-NM_001178496.3_PE2H4 | cds-NP_009706.3_PE2H4 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:537876-539705:+ | gene-YBR148W_S288C | rna-NM_001178496.3_S288C | cds-NP_009706.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000032.1:59092-60921:+ | gene-YBR148W_SA1 | rna-NM_001178496.3_SA1 | cds-NP_009706.3_SA1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:535846-537675:+ | gene-YBR148W_ThermosaccDry | rna-NM_001178496.3_ThermosaccDry | cds-NP_009706.3_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:517341-519170:+ | gene-YBR148W_VR1 | rna-NM_001178496.3_VR1 | cds-NP_009706.3_VR1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:510993-512821:+ | gene-YBR148W_ZTW1 | rna-NM_001178496.3_ZTW1 | cds-NP_009706.3_ZTW1 | 99.5 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:548239-550077:+ | gene-YBR148W_Sparadoxus | rna-NM_001178496.3_Sparadoxus | cds-NP_009706.3_Sparadoxus | 85.0 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |