Gene name: YSP3
Reference locus (S288C): YOR003W
Gene biotype: protein_coding
Description: Putative precursor of the subtilisin-like protease III; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; YSP3 has a paralog, PRB1, that arose from the whole genome duplication
Top 10 interactors (score): PRB1 (0.807); YHR202W (0.798); YDR018C (0.731); YMR147W (0.716); CTL1 (0.699); YHR127W (0.699); ESC8 (0.695); ATG13 (0.683); YBR284W (0.655); HMS1 (0.653); YRF1-1 (0.651); YGL081W (0.617); YRF1-8 (0.616); YBR138C (0.599); NCR1 (0.595); YDL012C (0.581); ADD37 (0.569); YRF1-3 (0.567); TRP3 (0.556); MGR1 (0.53)
Homologues (species, bitscore): PCSK9 (Homo sapiens, 158.3); Pcsk9 (Mus musculus, 150.2); pcsk9 (Danio rerio, 144.4); pcsk9 (Xenopus tropicalis, 154.5); S1P (Drosophila melanogaster, 57.0); S1P (Arabidopsis thaliana, 68.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:315815-317251:+ | gene-YOR003W_AKU4011 | rna-NM_001183422.1_AKU4011 | cds-NP_014645.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000152.1:131436-132872:+ | gene-YOR003W_BG1 | rna-NM_001183422.1_BG1 | cds-NP_014645.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:318588-320024:+ | gene-YOR003W_Bruggeman | rna-NM_001183422.1_Bruggeman | cds-NP_014645.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:316742-318178:+ | gene-YOR003W_CAT1 | rna-NM_001183422.1_CAT1 | cds-NP_014645.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:310489-311925:+ | gene-YOR003W_CBS1585 | rna-NM_001183422.1_CBS1585 | cds-NP_014645.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:314768-316204:+ | gene-YOR003W_CBS436 | rna-NM_001183422.1_CBS436 | cds-NP_014645.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:309795-311231:+ | gene-YOR003W_CBS6412 | rna-NM_001183422.1_CBS6412 | cds-NP_014645.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:317326-318762:+ | gene-YOR003W_CBS6413 | rna-NM_001183422.1_CBS6413 | cds-NP_014645.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:331136-332572:+ | gene-YOR003W_CENPK1137D | rna-NM_001183422.1_CENPK1137D | cds-NP_014645.1_CENPK1137D | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:312576-314012:+ | gene-YOR003W_EthanolRed | rna-NM_001183422.1_EthanolRed | cds-NP_014645.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:315903-317339:+ | gene-YOR003W_FaliES1 | rna-NM_001183422.1_FaliES1 | cds-NP_014645.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000015.1:11890-13326:- | gene-YOR003W_JAY291 | rna-NM_001183422.1_JAY291 | cds-NP_014645.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:322803-324239:+ | gene-YOR003W_MUCL30387 | rna-NM_001183422.1_MUCL30387 | cds-NP_014645.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:326239-327675:+ | gene-YOR003W_MUCL30388 | rna-NM_001183422.1_MUCL30388 | cds-NP_014645.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:317972-319408:+ | gene-YOR003W_MUCL39482 | rna-NM_001183422.1_MUCL39482 | cds-NP_014645.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:332826-334262:+ | gene-YOR003W_MUCL42920 | rna-NM_001183422.1_MUCL42920 | cds-NP_014645.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:331344-332780:+ | gene-YOR003W_NCIM3186 | rna-NM_001183422.1_NCIM3186 | cds-NP_014645.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:324657-326093:+ | gene-YOR003W_NCYC1407 | rna-NM_001183422.1_NCYC1407 | cds-NP_014645.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:319360-320796:+ | gene-YOR003W_PE2H3 | rna-NM_001183422.1_PE2H3 | cds-NP_014645.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:329739-331175:+ | gene-YOR003W_PE2H4 | rna-NM_001183422.1_PE2H4 | cds-NP_014645.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:331455-332891:+ | gene-YOR003W_S288C | rna-NM_001183422.1_S288C | cds-NP_014645.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000001.1:299427-300863:+ | gene-YOR003W_SA1 | rna-NM_001183422.1_SA1 | cds-NP_014645.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:314474-315910:+ | gene-YOR003W_ThermosaccDry | rna-NM_001183422.1_ThermosaccDry | cds-NP_014645.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:315311-316747:+ | gene-YOR003W_VR1 | rna-NM_001183422.1_VR1 | cds-NP_014645.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:49139-50575:+ | gene-YOR003W_ZTW1 | rna-NM_001183422.1_ZTW1 | cds-NP_014645.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:322988-324424:+ | gene-YOR003W_Sparadoxus | rna-NM_001183422.1_Sparadoxus | cds-NP_014645.1_Sparadoxus | 88.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |