Gene name: YRO2
Reference locus (S288C): YBR054W
Gene biotype: protein_coding
Description: Protein with a putative role in response to acid stress; null mutant is sensitive to acetic acid; transcription is regulated by Haa1p and induced in the presence of acetic acid; protein observed in plasma membrane foci in the presence of acetic acid; the authentic, non-tagged protein is detected in a phosphorylated state in highly purified mitochondria in high-throughput studies; Belongs to the archaeal/bacterial/fungal opsin family
Top 10 interactors (score): YGP1 (0.98); HAA1 (0.812); TPO2 (0.8); YBR053C (0.734); YLR297W (0.733); MRH1 (0.718); TPO3 (0.715); MSC1 (0.672); HSP26 (0.655); FUN14 (0.57); HRK1 (0.567); HXT5 (0.539); SSA4 (0.536); FMP40 (0.526); SSE2 (0.522); GPG1 (0.519); RTC3 (0.505); HSP78 (0.5); MSN4 (0.499); DYN1 (0.495)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:325530-326564:+ | gene-YBR054W_AKU4011 | rna-NM_001178402.1_AKU4011 | cds-NP_009610.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:315701-316735:+ | gene-YBR054W_BG1 | rna-NM_001178402.1_BG1 | cds-NP_009610.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:326270-327304:+ | gene-YBR054W_Bruggeman | rna-NM_001178402.1_Bruggeman | cds-NP_009610.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:329956-330990:+ | gene-YBR054W_CAT1 | rna-NM_001178402.1_CAT1 | cds-NP_009610.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:317827-318861:+ | gene-YBR054W_CBS1585 | rna-NM_001178402.1_CBS1585 | cds-NP_009610.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:325842-326876:+ | gene-YBR054W_CBS436 | rna-NM_001178402.1_CBS436 | cds-NP_009610.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:416043-417077:+ | gene-YBR054W_CBS6412 | rna-NM_001178402.1_CBS6412 | cds-NP_009610.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:322942-323976:+ | gene-YBR054W_CBS6413 | rna-NM_001178402.1_CBS6413 | cds-NP_009610.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:336861-337895:+ | gene-YBR054W_CENPK1137D | rna-NM_001178402.1_CENPK1137D | cds-NP_009610.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:452307-453341:+ | gene-YBR054W_EthanolRed | rna-NM_001178402.1_EthanolRed | cds-NP_009610.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:341585-342619:+ | gene-YBR054W_FaliES1 | rna-NM_001178402.1_FaliES1 | cds-NP_009610.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000209.1:9445-10479:+ | gene-YBR054W_JAY291 | rna-NM_001178402.1_JAY291 | cds-NP_009610.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:327895-328929:+ | gene-YBR054W_MUCL30387 | rna-NM_001178402.1_MUCL30387 | cds-NP_009610.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:327678-328703:+ | gene-YBR054W_MUCL30388 | rna-NM_001178402.1_MUCL30388 | cds-NP_009610.1_MUCL30388 | 98.6 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:317815-318849:+ | gene-YBR054W_MUCL39482 | rna-NM_001178402.1_MUCL39482 | cds-NP_009610.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:325019-326053:+ | gene-YBR054W_MUCL42920 | rna-NM_001178402.1_MUCL42920 | cds-NP_009610.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:342898-343932:+ | gene-YBR054W_NCIM3186 | rna-NM_001178402.1_NCIM3186 | cds-NP_009610.1_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:318725-319759:+ | gene-YBR054W_NCYC1407 | rna-NM_001178402.1_NCYC1407 | cds-NP_009610.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:330907-331941:+ | gene-YBR054W_PE2H3 | rna-NM_001178402.1_PE2H3 | cds-NP_009610.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:328583-329617:+ | gene-YBR054W_PE2H4 | rna-NM_001178402.1_PE2H4 | cds-NP_009610.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:343101-344135:+ | gene-YBR054W_S288C | rna-NM_001178402.1_S288C | cds-NP_009610.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000017.1:133402-134436:- | gene-YBR054W_SA1 | rna-NM_001178402.1_SA1 | cds-NP_009610.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:340596-341630:+ | gene-YBR054W_ThermosaccDry | rna-NM_001178402.1_ThermosaccDry | cds-NP_009610.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:322509-323543:+ | gene-YBR054W_VR1 | rna-NM_001178402.1_VR1 | cds-NP_009610.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:316324-317349:+ | gene-YBR054W_ZTW1 | rna-NM_001178402.1_ZTW1 | cds-NP_009610.1_ZTW1 | 98.5 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:352874-353908:+ | gene-YBR054W_Sparadoxus | rna-NM_001178402.1_Sparadoxus | cds-NP_009610.1_Sparadoxus | 93.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |