Gene name: YRF1-8
Reference locus (S288C): YOR396W
Gene biotype: protein_coding
Description: One of several telomeric Y' element-encoded DNA helicases; known as Y'-Help1 (Y'-HELicase Protein 1)
Top 10 interactors (score): YLR466C-A (0.919); YDR545C-A (0.909); YOR394C-A (0.79); YDR544C (0.783); YDR543C (0.783); TBF1 (0.78); YMR147W (0.745); CTL1 (0.715); PUS2 (0.71); YSP3 (0.616); PTC7 (0.615); MRM2 (0.572); YJR012C (0.567); FMP45 (0.499); THP2 (0.487); YBR134W (0.453); IST1 (0.451); YGL152C (0.45); RPS10A (0.45); HAT1 (0.45)
Homologues (species, bitscore): EIF4A1 (Homo sapiens, 51.2); Eif4a1 (Mus musculus, 51.2); mia3 (Danio rerio, 57.4); eif4a1 (Xenopus tropicalis, 51.2); CG15765 (Drosophila melanogaster, 72.8); inf-1 (Caenorhabditis elegans, 52.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:1046352-1046787:+ | gene-YOR396W_CAT1 | rna-NM_001184447.3_CAT1 | cds-NP_061495.4_CAT1 | 7.6 | 8.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:1085473-1090863:+ | gene-YOR396W_S288C | rna-NM_001184447.3_S288C | cds-NP_061495.4_S288C | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:437220-442631:+ | gene-YOR396W_Sparadoxus | rna-NM_001184447.3_Sparadoxus | cds-NP_061495.4_Sparadoxus | 97.2 | 99.9 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |