Gene name: YRB30
Reference locus (S288C): YGL164C
Gene biotype: protein_coding
Description: Ran-specific GTPase-activating protein 30; RanGTP-binding protein; inhibits RanGAP1 (Rna1p)-mediated GTP hydrolysis of RanGTP (Gsp1p); shares similarity to proteins in other fungi but not in higher eukaryotes
Top 10 interactors (score): GSP1 (0.819); YRB1 (0.786); RNA1 (0.748); CRM1 (0.662)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:194547-195887:- | gene-YGL164C_AKU4011 | rna-NM_001181029.1_AKU4011 | cds-NP_011351.1_AKU4011 | 97.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000132.1:214491-215813:+ | gene-YGL164C_BG1 | rna-NM_001181029.1_BG1 | cds-NP_011351.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:196710-198032:- | gene-YGL164C_Bruggeman | rna-NM_001181029.1_Bruggeman | cds-NP_011351.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:192580-193902:- | gene-YGL164C_CAT1 | rna-NM_001181029.1_CAT1 | cds-NP_011351.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:197686-199023:- | gene-YGL164C_CBS1585 | rna-NM_001181029.1_CBS1585 | cds-NP_011351.1_CBS1585 | 97.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:192570-193892:- | gene-YGL164C_CBS436 | rna-NM_001181029.1_CBS436 | cds-NP_011351.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:184149-185480:- | gene-YGL164C_CBS6412 | rna-NM_001181029.1_CBS6412 | cds-NP_011351.1_CBS6412 | 98.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:191998-193329:- | gene-YGL164C_CBS6413 | rna-NM_001181029.1_CBS6413 | cds-NP_011351.1_CBS6413 | 98.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:192240-193562:- | gene-YGL164C_CENPK1137D | rna-NM_001181029.1_CENPK1137D | cds-NP_011351.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:184354-185685:- | gene-YGL164C_EthanolRed | rna-NM_001181029.1_EthanolRed | cds-NP_011351.1_EthanolRed | 98.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:185600-186931:- | gene-YGL164C_FaliES1 | rna-NM_001181029.1_FaliES1 | cds-NP_011351.1_FaliES1 | 98.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000090.1:35803-37116:- | gene-YGL164C_JAY291 | rna-NM_001181029.1_JAY291 | cds-NP_011351.1_JAY291 | 99.0 | 99.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:193958-195280:- | gene-YGL164C_MUCL30387 | rna-NM_001181029.1_MUCL30387 | cds-NP_011351.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:197048-198370:- | gene-YGL164C_MUCL30388 | rna-NM_001181029.1_MUCL30388 | cds-NP_011351.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:194710-196050:- | gene-YGL164C_MUCL39482 | rna-NM_001181029.1_MUCL39482 | cds-NP_011351.1_MUCL39482 | 97.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:197298-198620:- | gene-YGL164C_MUCL42920 | rna-NM_001181029.1_MUCL42920 | cds-NP_011351.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:191978-193300:- | gene-YGL164C_NCIM3186 | rna-NM_001181029.1_NCIM3186 | cds-NP_011351.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:186176-187516:- | gene-YGL164C_NCYC1407 | rna-NM_001181029.1_NCYC1407 | cds-NP_011351.1_NCYC1407 | 97.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:188104-189417:- | gene-YGL164C_PE2H3 | rna-NM_001181029.1_PE2H3 | cds-NP_011351.1_PE2H3 | 99.0 | 99.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:187652-188974:- | gene-YGL164C_PE2H4 | rna-NM_001181029.1_PE2H4 | cds-NP_011351.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:191978-193300:- | gene-YGL164C_S288C | rna-NM_001181029.1_S288C | cds-NP_011351.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000067.1:51762-53084:- | gene-YGL164C_SA1 | rna-NM_001181029.1_SA1 | cds-NP_011351.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:185829-187160:- | gene-YGL164C_ThermosaccDry | rna-NM_001181029.1_ThermosaccDry | cds-NP_011351.1_ThermosaccDry | 98.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:193006-194328:- | gene-YGL164C_VR1 | rna-NM_001181029.1_VR1 | cds-NP_011351.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:184279-185615:- | gene-YGL164C_ZTW1 | rna-NM_001181029.1_ZTW1 | cds-NP_011351.1_ZTW1 | 97.6 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:191075-192397:- | gene-YGL164C_Sparadoxus | rna-NM_001181029.1_Sparadoxus | cds-NP_011351.1_Sparadoxus | 87.4 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |