Gene name: YRB2
Reference locus (S288C): YIL063C
Gene biotype: protein_coding
Description: Ran-specific GTPase-activating protein 2; Protein of unknown function; involved in nuclear processes of the Ran-GTPase cycle; involved in nuclear protein export; contains Ran Binding Domain and FxFG repeats; interacts with Srm1p, GTP-Gsp1p, Rna1p and Crm1p; relocalizes to the cytosol in response to hypoxia; not essential for viability
Top 10 interactors (score): GSP1 (0.998); CRM1 (0.997); UBC9 (0.995); NSP1 (0.986); MEX67 (0.981); RNA1 (0.97); NUP2 (0.965); HDA1 (0.943); SMT3 (0.943); NTF2 (0.93); YRB1 (0.928); YRA1 (0.927); PFS2 (0.925); SSE1 (0.918); SSE2 (0.917); SSA1 (0.912); SSA2 (0.912); KAR2 (0.911); NAB3 (0.911); SSA4 (0.911)
Homologues (species, bitscore): RANBP3 (Homo sapiens, 73.6); Ranbp3 (Mus musculus, 72.0); ranbp3a (Danio rerio, 80.5); ranbp3 (Xenopus tropicalis, 78.6); Nup358 (Drosophila melanogaster, 69.3); npp-9 (Caenorhabditis elegans, 55.5); SIRANBP (Arabidopsis thaliana, 60.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:239429-240412:- | gene-YIL063C_AKU4011 | rna-NM_001179413.1_AKU4011 | cds-NP_012201.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000164.1:101358-102341:- | gene-YIL063C_BG1 | rna-NM_001179413.1_BG1 | cds-NP_012201.1_BG1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:244844-245827:- | gene-YIL063C_Bruggeman | rna-NM_001179413.1_Bruggeman | cds-NP_012201.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:235119-236102:- | gene-YIL063C_CAT1 | rna-NM_001179413.1_CAT1 | cds-NP_012201.1_CAT1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:239000-239983:- | gene-YIL063C_CBS1585 | rna-NM_001179413.1_CBS1585 | cds-NP_012201.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005351.1:235047-236030:- | gene-YIL063C_CBS436 | rna-NM_001179413.1_CBS436 | cds-NP_012201.1_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005335.1:236375-237358:- | gene-YIL063C_CBS6412 | rna-NM_001179413.1_CBS6412 | cds-NP_012201.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:230920-231903:- | gene-YIL063C_CBS6413 | rna-NM_001179413.1_CBS6413 | cds-NP_012201.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:234810-235793:- | gene-YIL063C_CENPK1137D | rna-NM_001179413.1_CENPK1137D | cds-NP_012201.1_CENPK1137D | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005479.1:223727-224710:- | gene-YIL063C_EthanolRed | rna-NM_001179413.1_EthanolRed | cds-NP_012201.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:240630-241613:- | gene-YIL063C_FaliES1 | rna-NM_001179413.1_FaliES1 | cds-NP_012201.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000365.1:56520-57503:+ | gene-YIL063C_JAY291 | rna-NM_001179413.1_JAY291 | cds-NP_012201.1_JAY291 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:243064-244047:- | gene-YIL063C_MUCL30387 | rna-NM_001179413.1_MUCL30387 | cds-NP_012201.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005447.1:239669-240652:- | gene-YIL063C_MUCL30388 | rna-NM_001179413.1_MUCL30388 | cds-NP_012201.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:239846-240829:- | gene-YIL063C_MUCL39482 | rna-NM_001179413.1_MUCL39482 | cds-NP_012201.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:243210-244193:- | gene-YIL063C_MUCL42920 | rna-NM_001179413.1_MUCL42920 | cds-NP_012201.1_MUCL42920 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:242761-243744:- | gene-YIL063C_NCIM3186 | rna-NM_001179413.1_NCIM3186 | cds-NP_012201.1_NCIM3186 | 98.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005271.1:244122-245105:- | gene-YIL063C_NCYC1407 | rna-NM_001179413.1_NCYC1407 | cds-NP_012201.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:238102-239085:- | gene-YIL063C_PE2H3 | rna-NM_001179413.1_PE2H3 | cds-NP_012201.1_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:232817-233800:- | gene-YIL063C_PE2H4 | rna-NM_001179413.1_PE2H4 | cds-NP_012201.1_PE2H4 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:242761-243744:- | gene-YIL063C_S288C | rna-NM_001179413.1_S288C | cds-NP_012201.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000031.1:82097-83080:+ | gene-YIL063C_SA1 | rna-NM_001179413.1_SA1 | cds-NP_012201.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:239293-240276:- | gene-YIL063C_ThermosaccDry | rna-NM_001179413.1_ThermosaccDry | cds-NP_012201.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:236976-237959:- | gene-YIL063C_VR1 | rna-NM_001179413.1_VR1 | cds-NP_012201.1_VR1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000019.1:213555-214538:- | gene-YIL063C_ZTW1 | rna-NM_001179413.1_ZTW1 | cds-NP_012201.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:237640-238623:- | gene-YIL063C_Sparadoxus | rna-NM_001179413.1_Sparadoxus | cds-NP_012201.1_Sparadoxus | 89.5 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |