Gene name: YPT35
Reference locus (S288C): YHR105W
Gene biotype: protein_coding
Description: Endosomal protein of unknown function; contains a phox (PX) homology domain; binds to both phosphatidylinositol-3-phosphate (PtdIns(3)P) and proteins involved in ER-Golgi or vesicular transport; Belongs to the YPT35 family
Top 10 interactors (score): MCP1 (0.922); SPO71 (0.892); VPS13 (0.886); MVP1 (0.748); YET1 (0.693); SVL3 (0.691); YFR016C (0.671); SNX3 (0.671); NVJ1 (0.67); SDS24 (0.659); MDM1 (0.65); IES2 (0.619); VPS5 (0.611); VPS17 (0.595); COS10 (0.572); ATG20 (0.572); SPR6 (0.563); ILM1 (0.528); OLA1 (0.499); MON2 (0.497)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:311680-312324:+ | gene-YHR105W_AKU4011 | rna-NM_001179235.1_AKU4011 | cds-NP_011973.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000141.1:205579-206223:- | gene-YHR105W_BG1 | rna-NM_001179235.1_BG1 | cds-NP_011973.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:318976-319620:+ | gene-YHR105W_Bruggeman | rna-NM_001179235.1_Bruggeman | cds-NP_011973.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:314121-314765:+ | gene-YHR105W_CAT1 | rna-NM_001179235.1_CAT1 | cds-NP_011973.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:310703-311347:+ | gene-YHR105W_CBS1585 | rna-NM_001179235.1_CBS1585 | cds-NP_011973.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:308064-308708:+ | gene-YHR105W_CBS436 | rna-NM_001179235.1_CBS436 | cds-NP_011973.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:312515-313159:+ | gene-YHR105W_CBS6412 | rna-NM_001179235.1_CBS6412 | cds-NP_011973.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:311731-312375:+ | gene-YHR105W_CBS6413 | rna-NM_001179235.1_CBS6413 | cds-NP_011973.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:317937-318581:+ | gene-YHR105W_CENPK1137D | rna-NM_001179235.1_CENPK1137D | cds-NP_011973.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:370588-371232:+ | gene-YHR105W_EthanolRed | rna-NM_001179235.1_EthanolRed | cds-NP_011973.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:312076-312720:+ | gene-YHR105W_FaliES1 | rna-NM_001179235.1_FaliES1 | cds-NP_011973.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000045.1:32661-33305:+ | gene-YHR105W_JAY291 | rna-NM_001179235.1_JAY291 | cds-NP_011973.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:318700-319344:+ | gene-YHR105W_MUCL30387 | rna-NM_001179235.1_MUCL30387 | cds-NP_011973.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:318354-318998:+ | gene-YHR105W_MUCL30388 | rna-NM_001179235.1_MUCL30388 | cds-NP_011973.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:311044-311688:+ | gene-YHR105W_MUCL39482 | rna-NM_001179235.1_MUCL39482 | cds-NP_011973.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:317296-317940:+ | gene-YHR105W_MUCL42920 | rna-NM_001179235.1_MUCL42920 | cds-NP_011973.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:324648-325292:+ | gene-YHR105W_NCIM3186 | rna-NM_001179235.1_NCIM3186 | cds-NP_011973.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:313253-313897:+ | gene-YHR105W_NCYC1407 | rna-NM_001179235.1_NCYC1407 | cds-NP_011973.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:312697-313341:+ | gene-YHR105W_PE2H3 | rna-NM_001179235.1_PE2H3 | cds-NP_011973.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:320124-320768:+ | gene-YHR105W_PE2H4 | rna-NM_001179235.1_PE2H4 | cds-NP_011973.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:324766-325410:+ | gene-YHR105W_S288C | rna-NM_001179235.1_S288C | cds-NP_011973.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000014.1:33566-34210:- | gene-YHR105W_SA1 | rna-NM_001179235.1_SA1 | cds-NP_011973.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:313159-313803:+ | gene-YHR105W_ThermosaccDry | rna-NM_001179235.1_ThermosaccDry | cds-NP_011973.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:320785-321429:+ | gene-YHR105W_VR1 | rna-NM_001179235.1_VR1 | cds-NP_011973.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:304195-304839:+ | gene-YHR105W_ZTW1 | rna-NM_001179235.1_ZTW1 | cds-NP_011973.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:309839-310483:+ | gene-YHR105W_Sparadoxus | rna-NM_001179235.1_Sparadoxus | cds-NP_011973.1_Sparadoxus | 87.9 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |