Gene name: YPT32
Reference locus (S288C): YGL210W
Gene biotype: protein_coding
Description: GTP-binding protein YPT32/YPT11; Rab family GTPase involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi; protein abundance increases in response to DNA replication stress; YPT32 has a paralog, YPT31, that arose from the whole genome duplication
Top 10 interactors (score): MYO2 (0.998); GYP1 (0.995); SEC2 (0.993); GDI1 (0.99); YPT1 (0.983); SEC4 (0.976); MYO4 (0.968); PIK1 (0.961); YPT31 (0.956); VAM6 (0.954); SEC15 (0.951); TRS120 (0.943); TRS130 (0.941); GYP6 (0.94); SEC7 (0.93); RCY1 (0.92); MMR1 (0.902); TRS85 (0.898); SNC1 (0.897); ARF3 (0.894)
Homologues (species, bitscore): RAB11B (Homo sapiens, 270.4); Rab11b (Mus musculus, 270.0); rab11a (Danio rerio, 273.1); rab11b.2 (Xenopus tropicalis, 268.5); Rab11 (Drosophila melanogaster, 269.6); rab-11.1 (Caenorhabditis elegans, 272.7); RABA1e (Arabidopsis thaliana, 262.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:95138-95806:+ | gene-YGL210W_AKU4011 | rna-NM_001181075.1_AKU4011 | cds-NP_011305.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000175.1:88201-88869:+ | gene-YGL210W_BG1 | rna-NM_001181075.1_BG1 | cds-NP_011305.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:95647-96315:+ | gene-YGL210W_Bruggeman | rna-NM_001181075.1_Bruggeman | cds-NP_011305.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:94313-94981:+ | gene-YGL210W_CAT1 | rna-NM_001181075.1_CAT1 | cds-NP_011305.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:99443-100111:+ | gene-YGL210W_CBS1585 | rna-NM_001181075.1_CBS1585 | cds-NP_011305.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:95008-95676:+ | gene-YGL210W_CBS436 | rna-NM_001181075.1_CBS436 | cds-NP_011305.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:86574-87242:+ | gene-YGL210W_CBS6412 | rna-NM_001181075.1_CBS6412 | cds-NP_011305.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:93278-93946:+ | gene-YGL210W_CBS6413 | rna-NM_001181075.1_CBS6413 | cds-NP_011305.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:93822-94490:+ | gene-YGL210W_CENPK1137D | rna-NM_001181075.1_CENPK1137D | cds-NP_011305.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:85939-86607:+ | gene-YGL210W_EthanolRed | rna-NM_001181075.1_EthanolRed | cds-NP_011305.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:86782-87450:+ | gene-YGL210W_FaliES1 | rna-NM_001181075.1_FaliES1 | cds-NP_011305.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000397.1:13191-13859:+ | gene-YGL210W_JAY291 | rna-NM_001181075.1_JAY291 | cds-NP_011305.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:95562-96230:+ | gene-YGL210W_MUCL30387 | rna-NM_001181075.1_MUCL30387 | cds-NP_011305.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:97740-98408:+ | gene-YGL210W_MUCL30388 | rna-NM_001181075.1_MUCL30388 | cds-NP_011305.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:95956-96624:+ | gene-YGL210W_MUCL39482 | rna-NM_001181075.1_MUCL39482 | cds-NP_011305.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:99060-99728:+ | gene-YGL210W_MUCL42920 | rna-NM_001181075.1_MUCL42920 | cds-NP_011305.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:93792-94460:+ | gene-YGL210W_NCIM3186 | rna-NM_001181075.1_NCIM3186 | cds-NP_011305.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:87678-88346:+ | gene-YGL210W_NCYC1407 | rna-NM_001181075.1_NCYC1407 | cds-NP_011305.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:90506-91174:+ | gene-YGL210W_PE2H3 | rna-NM_001181075.1_PE2H3 | cds-NP_011305.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:90054-90722:+ | gene-YGL210W_PE2H4 | rna-NM_001181075.1_PE2H4 | cds-NP_011305.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:93792-94460:+ | gene-YGL210W_S288C | rna-NM_001181075.1_S288C | cds-NP_011305.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000002.1:280821-281489:- | gene-YGL210W_SA1 | rna-NM_001181075.1_SA1 | cds-NP_011305.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:87043-87711:+ | gene-YGL210W_ThermosaccDry | rna-NM_001181075.1_ThermosaccDry | cds-NP_011305.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:94920-95588:+ | gene-YGL210W_VR1 | rna-NM_001181075.1_VR1 | cds-NP_011305.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:86083-86751:+ | gene-YGL210W_ZTW1 | rna-NM_001181075.1_ZTW1 | cds-NP_011305.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:93233-93901:+ | gene-YGL210W_Sparadoxus | rna-NM_001181075.1_Sparadoxus | cds-NP_011305.1_Sparadoxus | 95.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |