Gene name: YPS3
Reference locus (S288C): YLR121C
Gene biotype: protein_coding
Description: Aspartic proteinase yapsin-3; Aspartic protease; member of the yapsin family of proteases involved in cell wall growth and maintenance; attached to the plasma membrane via a glycosylphosphatidylinositol (GPI) anchor; Belongs to the peptidase A1 family
Top 10 interactors (score): NCW2 (0.873); PRB1 (0.727); DDI1 (0.717); YPS1 (0.672); MSB2 (0.653); IRC22 (0.62); PST1 (0.615); PIR3 (0.609); TOH1 (0.606); YPS5 (0.565); YIL082W-A (0.562); PRC1 (0.558); STE24 (0.552); PRY2 (0.543); CRH1 (0.534); KEX2 (0.531); YSP3 (0.522); KEX1 (0.504); YGR109W-B (0.499); PLB3 (0.498)
Homologues (species, bitscore): PGC (Homo sapiens, 129.0); Cym (Mus musculus, 109.0); NAPSA (Danio rerio, 95.5); pga4 (Xenopus tropicalis, 116.7); CG5860 (Drosophila melanogaster, 99.8); asp-1 (Caenorhabditis elegans, 94.4); AT1G62290 (Arabidopsis thaliana, 80.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:371227-372753:- | gene-YLR121C_AKU4011 | rna-NM_001182008.1_AKU4011 | cds-NP_013222.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000212.1:335003-336529:- | gene-YLR121C_BG1 | rna-NM_001182008.1_BG1 | cds-NP_013222.1_BG1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:382351-383877:- | gene-YLR121C_Bruggeman | rna-NM_001182008.1_Bruggeman | cds-NP_013222.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:382268-383794:- | gene-YLR121C_CAT1 | rna-NM_001182008.1_CAT1 | cds-NP_013222.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:378370-379896:- | gene-YLR121C_CBS1585 | rna-NM_001182008.1_CBS1585 | cds-NP_013222.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:368608-370134:- | gene-YLR121C_CBS436 | rna-NM_001182008.1_CBS436 | cds-NP_013222.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:376788-378314:- | gene-YLR121C_CBS6412 | rna-NM_001182008.1_CBS6412 | cds-NP_013222.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:378636-380162:- | gene-YLR121C_CBS6413 | rna-NM_001182008.1_CBS6413 | cds-NP_013222.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:373766-375292:- | gene-YLR121C_CENPK1137D | rna-NM_001182008.1_CENPK1137D | cds-NP_013222.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:371428-372954:- | gene-YLR121C_EthanolRed | rna-NM_001182008.1_EthanolRed | cds-NP_013222.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:370939-372465:- | gene-YLR121C_FaliES1 | rna-NM_001182008.1_FaliES1 | cds-NP_013222.1_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000117.1:20733-22259:+ | gene-YLR121C_JAY291 | rna-NM_001182008.1_JAY291 | cds-NP_013222.1_JAY291 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:378643-380169:- | gene-YLR121C_MUCL30387 | rna-NM_001182008.1_MUCL30387 | cds-NP_013222.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:387424-388950:- | gene-YLR121C_MUCL30388 | rna-NM_001182008.1_MUCL30388 | cds-NP_013222.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:378879-380405:- | gene-YLR121C_MUCL39482 | rna-NM_001182008.1_MUCL39482 | cds-NP_013222.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:379005-380531:- | gene-YLR121C_MUCL42920 | rna-NM_001182008.1_MUCL42920 | cds-NP_013222.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:388718-390244:- | gene-YLR121C_NCIM3186 | rna-NM_001182008.1_NCIM3186 | cds-NP_013222.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:371152-372678:- | gene-YLR121C_NCYC1407 | rna-NM_001182008.1_NCYC1407 | cds-NP_013222.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:376713-378239:- | gene-YLR121C_PE2H3 | rna-NM_001182008.1_PE2H3 | cds-NP_013222.1_PE2H3 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:376454-377980:- | gene-YLR121C_PE2H4 | rna-NM_001182008.1_PE2H4 | cds-NP_013222.1_PE2H4 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:388744-390270:- | gene-YLR121C_S288C | rna-NM_001182008.1_S288C | cds-NP_013222.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000055.1:14619-16145:- | gene-YLR121C_SA1 | rna-NM_001182008.1_SA1 | cds-NP_013222.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:372149-373675:- | gene-YLR121C_ThermosaccDry | rna-NM_001182008.1_ThermosaccDry | cds-NP_013222.1_ThermosaccDry | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:384608-386134:- | gene-YLR121C_VR1 | rna-NM_001182008.1_VR1 | cds-NP_013222.1_VR1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000023.1:369947-371473:- | gene-YLR121C_ZTW1 | rna-NM_001182008.1_ZTW1 | cds-NP_013222.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:379767-381293:- | gene-YLR121C_Sparadoxus | rna-NM_001182008.1_Sparadoxus | cds-NP_013222.1_Sparadoxus | 89.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |