Gene name: YPR204W
Reference locus (S288C): YPR204W
Gene biotype: protein_coding
Description: Y' element atp-dependent helicase ypr204w; DNA helicase encoded within the telomeric Y' element; Y' -helicase protein 1
Top 10 interactors (score): DHR2 (0.96); YPR204C-A (0.896); YPR203W (0.896); YPR202W (0.896); ESL1 (0.78); LEE1 (0.631); PAU4 (0.619); PAU12 (0.618); YLR046C (0.613); PAU15 (0.573); ESL2 (0.573); YLR149C (0.572); PAU2 (0.57); PAU1 (0.489); PAU14 (0.489); RIO1 (0.487); DAP1 (0.485); PAU18 (0.483); PAU6 (0.483); PAU5 (0.453)
Homologues (species, bitscore): EIF4A1 (Homo sapiens, 50.8); Eif4a1 (Mus musculus, 50.8); eif4a2 (Danio rerio, 50.8); eif4a1 (Xenopus tropicalis, 51.2); inf-1 (Caenorhabditis elegans, 53.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005524.1:1-1829:- | gene-YPR204W_CAT1 | rna-NM_001184301.1_CAT1 | cds-NP_015530.1_CAT1 | 42.2 | 51.5 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:551403-552503:+ | gene-YPR204W_MUCL30387 | rna-NM_001184301.1_MUCL30387 | cds-NP_015530.1_MUCL30387 | 28.1 | 31.4 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:1-924:- | gene-YPR204W_MUCL30388 | rna-NM_001184301.1_MUCL30388 | cds-NP_015530.1_MUCL30388 | 28.6 | 29.8 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:944586-947684:+ | gene-YPR204W_NCIM3186 | rna-NM_001184301.1_NCIM3186 | cds-NP_015530.1_NCIM3186 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:944603-947701:+ | gene-YPR204W_S288C | rna-NM_001184301.1_S288C | cds-NP_015530.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:560582-561298:+ | gene-YPR204W_VR1 | rna-NM_001184301.1_VR1 | cds-NP_015530.1_VR1 | 22.7 | 23.1 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |