Gene name: YPR158W-A
Reference locus (S288C): YPR158W-A
Gene biotype: protein_coding
Description: Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag
Top 10 interactors (score): Unknown
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CAT1 | GCA_001738705.1 | Bioethanol | South America | MBWC01000349.1:408-482:+ | gene-YPR158W-A_CAT1 | rna-NM_001184397.1_CAT1 | cds-NP_058194.1_CAT1 | 5.6 | 5.6 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000188.1:1-1240:+ | gene-YPR158W-A_JAY291 | rna-NM_001184397.1_JAY291 | cds-NP_058194.1_JAY291 | 85.1 | 93.7 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:844709-846031:+ | gene-YPR158W-A_S288C | rna-NM_001184397.1_S288C | cds-NP_058194.1_S288C | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000039.1:97250-97577:+ | gene-YPR158W-A_SA1 | rna-NM_001184397.1_SA1 | cds-NP_058194.1_SA1 | 24.7 | 24.7 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |