Gene name: YPR137C-B
Reference locus (S288C): YPR137C-B
Gene biotype: protein_coding
Description: Transposon Ty1-PR1 Gag-Pol polyprotein; Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes
Top 10 interactors (score): Unknown
Homologues (species, bitscore): CRK8 (Arabidopsis thaliana, 92.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | MBVY01000223.1:1-765:+ | gene-YPR137C-B_Bruggeman | rna-NM_001184394.2_Bruggeman | cds-NP_058191.1_Bruggeman | 14.5 | 14.5 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | MBWC01000403.1:1-599:- | gene-YPR137C-B_CAT1 | rna-NM_001184394.2_CAT1 | cds-NP_058191.1_CAT1 | 11.2 | 11.3 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:804984-810252:- | gene-YPR137C-B_NCIM3186 | rna-NM_001184394.2_NCIM3186 | cds-NP_058191.1_NCIM3186 | 90.7 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:805001-810269:- | gene-YPR137C-B_S288C | rna-NM_001184394.2_S288C | cds-NP_058191.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | MBVZ01000093.1:247-722:+ | gene-YPR137C-B_VR1 | rna-NM_001184394.2_VR1 | cds-NP_058191.1_VR1 | 9.0 | 9.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |