Gene name: YPR078C
Reference locus (S288C): YPR078C
Gene biotype: protein_coding
Description: Uncharacterized protein YPR078C; Putative protein of unknown function; possible role in DNA metabolism and/or in genome stability; expression is heat-inducible
Top 10 interactors (score): MRPL36 (0.768); STV1 (0.671); CSR2 (0.611); RRD2 (0.598); VMA6 (0.577); RAV1 (0.574); RRD1 (0.561); WHI2 (0.487); VMA2 (0.48); YKL177W (0.454); YDR455C (0.452)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:668830-669948:- | gene-YPR078C_AKU4011 | rna-NM_001184175.1_AKU4011 | cds-NP_015403.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:227735-228853:+ | gene-YPR078C_BG1 | rna-NM_001184175.1_BG1 | cds-NP_015403.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:746506-747624:- | gene-YPR078C_Bruggeman | rna-NM_001184175.1_Bruggeman | cds-NP_015403.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:790807-791925:- | gene-YPR078C_CAT1 | rna-NM_001184175.1_CAT1 | cds-NP_015403.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:672506-673624:- | gene-YPR078C_CBS1585 | rna-NM_001184175.1_CBS1585 | cds-NP_015403.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:686881-687999:- | gene-YPR078C_CBS436 | rna-NM_001184175.1_CBS436 | cds-NP_015403.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:676253-677371:- | gene-YPR078C_CBS6412 | rna-NM_001184175.1_CBS6412 | cds-NP_015403.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:669465-670583:- | gene-YPR078C_CBS6413 | rna-NM_001184175.1_CBS6413 | cds-NP_015403.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:697109-698227:- | gene-YPR078C_CENPK1137D | rna-NM_001184175.1_CENPK1137D | cds-NP_015403.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:996026-997144:- | gene-YPR078C_EthanolRed | rna-NM_001184175.1_EthanolRed | cds-NP_015403.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:674663-675781:- | gene-YPR078C_FaliES1 | rna-NM_001184175.1_FaliES1 | cds-NP_015403.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000443.1:7715-8833:- | gene-YPR078C_JAY291 | rna-NM_001184175.1_JAY291 | cds-NP_015403.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:687766-688884:- | gene-YPR078C_MUCL30387 | rna-NM_001184175.1_MUCL30387 | cds-NP_015403.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:686471-687589:- | gene-YPR078C_MUCL30388 | rna-NM_001184175.1_MUCL30388 | cds-NP_015403.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:665763-666881:- | gene-YPR078C_MUCL39482 | rna-NM_001184175.1_MUCL39482 | cds-NP_015403.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:728606-729724:- | gene-YPR078C_MUCL42920 | rna-NM_001184175.1_MUCL42920 | cds-NP_015403.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:697130-698248:- | gene-YPR078C_NCIM3186 | rna-NM_001184175.1_NCIM3186 | cds-NP_015403.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:673940-675058:- | gene-YPR078C_NCYC1407 | rna-NM_001184175.1_NCYC1407 | cds-NP_015403.1_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:680587-681705:- | gene-YPR078C_PE2H3 | rna-NM_001184175.1_PE2H3 | cds-NP_015403.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:680235-681353:- | gene-YPR078C_PE2H4 | rna-NM_001184175.1_PE2H4 | cds-NP_015403.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:697147-698265:- | gene-YPR078C_S288C | rna-NM_001184175.1_S288C | cds-NP_015403.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000026.1:2423-3541:+ | gene-YPR078C_SA1 | rna-NM_001184175.1_SA1 | cds-NP_015403.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:674438-675556:- | gene-YPR078C_ThermosaccDry | rna-NM_001184175.1_ThermosaccDry | cds-NP_015403.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:690577-691695:- | gene-YPR078C_VR1 | rna-NM_001184175.1_VR1 | cds-NP_015403.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:673651-674769:- | gene-YPR078C_ZTW1 | rna-NM_001184175.1_ZTW1 | cds-NP_015403.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:674371-675483:- | gene-YPR078C_Sparadoxus | rna-NM_001184175.1_Sparadoxus | cds-NP_015403.1_Sparadoxus | 85.9 | 98.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |