YPR071W (YPR071W)


Gene profile

Gene name: YPR071W
Reference locus (S288C): YPR071W
Gene biotype: protein_coding

Description: Putative membrane protein; YPR071W is not an essential gene; YPR071W has a paralog, YIL029C, that arose from a single-locus duplication

Top 10 interactors (score): ABM1 (0.813); IRC10 (0.76); YLR146W-A (0.697); ENV11 (0.521); PAU17 (0.499); YGL039W (0.483); DIA3 (0.482); ECM23 (0.453); BSC4 (0.452); PAU2 (0.45); TRE1 (0.403); SSS1 (0.403)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005310.1:659845-660480:+ gene-YPR071W_AKU4011 rna-NM_001184168.1_AKU4011 cds-NP_015396.1_AKU4011 98.5 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000091.1:237206-237841:- gene-YPR071W_BG1 rna-NM_001184168.1_BG1 cds-NP_015396.1_BG1 99.8 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005518.1:737517-738152:+ gene-YPR071W_Bruggeman rna-NM_001184168.1_Bruggeman cds-NP_015396.1_Bruggeman 99.8 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005534.1:780961-781596:+ gene-YPR071W_CAT1 rna-NM_001184168.1_CAT1 cds-NP_015396.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005374.1:663533-664168:+ gene-YPR071W_CBS1585 rna-NM_001184168.1_CBS1585 cds-NP_015396.1_CBS1585 94.9 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005358.1:677903-678538:+ gene-YPR071W_CBS436 rna-NM_001184168.1_CBS436 cds-NP_015396.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005342.1:667280-667915:+ gene-YPR071W_CBS6412 rna-NM_001184168.1_CBS6412 cds-NP_015396.1_CBS6412 94.9 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005326.1:660478-661113:+ gene-YPR071W_CBS6413 rna-NM_001184168.1_CBS6413 cds-NP_015396.1_CBS6413 94.9 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001537.1:688135-688770:+ gene-YPR071W_CENPK1137D rna-NM_001184168.1_CENPK1137D cds-NP_015396.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005486.1:987039-987674:+ gene-YPR071W_EthanolRed rna-NM_001184168.1_EthanolRed cds-NP_015396.1_EthanolRed 95.1 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005550.1:665676-666311:+ gene-YPR071W_FaliES1 rna-NM_001184168.1_FaliES1 cds-NP_015396.1_FaliES1 95.1 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000446.1:37623-38258:+ gene-YPR071W_JAY291 rna-NM_001184168.1_JAY291 cds-NP_015396.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005422.1:678777-679412:+ gene-YPR071W_MUCL30387 rna-NM_001184168.1_MUCL30387 cds-NP_015396.1_MUCL30387 99.8 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005454.1:677482-678117:+ gene-YPR071W_MUCL30388 rna-NM_001184168.1_MUCL30388 cds-NP_015396.1_MUCL30388 99.8 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005294.1:656790-657425:+ gene-YPR071W_MUCL39482 rna-NM_001184168.1_MUCL39482 cds-NP_015396.1_MUCL39482 94.9 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005438.1:719618-720253:+ gene-YPR071W_MUCL42920 rna-NM_001184168.1_MUCL42920 cds-NP_015396.1_MUCL42920 99.8 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011825.1:688155-688790:+ gene-YPR071W_NCIM3186 rna-NM_001184168.1_NCIM3186 cds-NP_015396.1_NCIM3186 97.0 100.0 Verified 1 1 0 False False False True False
NCYC1407 GCA_001738225.1 Sake Asia CM005278.1:664718-665353:+ gene-YPR071W_NCYC1407 rna-NM_001184168.1_NCYC1407 cds-NP_015396.1_NCYC1407 98.7 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994155.1:670926-671561:+ gene-YPR071W_PE2H3 rna-NM_001184168.1_PE2H3 cds-NP_015396.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999887.1:670574-671209:+ gene-YPR071W_PE2H4 rna-NM_001184168.1_PE2H4 cds-NP_015396.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001148.4:688172-688807:+ gene-YPR071W_S288C rna-NM_001184168.1_S288C cds-NP_015396.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000026.1:11883-12518:- gene-YPR071W_SA1 rna-NM_001184168.1_SA1 cds-NP_015396.1_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005502.1:665451-666086:+ gene-YPR071W_ThermosaccDry rna-NM_001184168.1_ThermosaccDry cds-NP_015396.1_ThermosaccDry 95.1 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005470.1:681600-682235:+ gene-YPR071W_VR1 rna-NM_001184168.1_VR1 cds-NP_015396.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000033.1:664679-665314:+ gene-YPR071W_ZTW1 rna-NM_001184168.1_ZTW1 cds-NP_015396.1_ZTW1 99.8 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047502.1:665448-666093:+ gene-YPR071W_Sparadoxus rna-NM_001184168.1_Sparadoxus cds-NP_015396.1_Sparadoxus 70.7 97.1 Unannotated 1 1 0 False False False True False

Additional files