YPR053C (YPR053C)

Gene profile

Gene name: YPR053C
Reference locus (S288C): YPR053C
Gene biotype: protein_coding

Description: Uncharacterized protein YPR053C; Putative protein of unknown function; conserved among S. cerevisiae strains; YPR053C is not an essential gene; partially overlaps verified ORF NHP6A/YPR052C

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005310.1:637453-637908:- gene-YPR053C_AKU4011 rna-NM_001348887.1_AKU4011 cds-NP_001335825.1_AKU4011 99.5 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000091.1:259771-260226:+ gene-YPR053C_BG1 rna-NM_001348887.1_BG1 cds-NP_001335825.1_BG1 99.7 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005518.1:715122-715577:- gene-YPR053C_Bruggeman rna-NM_001348887.1_Bruggeman cds-NP_001335825.1_Bruggeman 99.5 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005534.1:758576-759031:- gene-YPR053C_CAT1 rna-NM_001348887.1_CAT1 cds-NP_001335825.1_CAT1 99.7 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005374.1:641139-641594:- gene-YPR053C_CBS1585 rna-NM_001348887.1_CBS1585 cds-NP_001335825.1_CBS1585 99.3 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005358.1:655518-655973:- gene-YPR053C_CBS436 rna-NM_001348887.1_CBS436 cds-NP_001335825.1_CBS436 99.7 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005342.1:644887-645342:- gene-YPR053C_CBS6412 rna-NM_001348887.1_CBS6412 cds-NP_001335825.1_CBS6412 99.3 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005326.1:638088-638543:- gene-YPR053C_CBS6413 rna-NM_001348887.1_CBS6413 cds-NP_001335825.1_CBS6413 99.3 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001537.1:665753-666208:- gene-YPR053C_CENPK1137D rna-NM_001348887.1_CENPK1137D cds-NP_001335825.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005486.1:964644-965099:- gene-YPR053C_EthanolRed rna-NM_001348887.1_EthanolRed cds-NP_001335825.1_EthanolRed 99.3 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005550.1:643281-643736:- gene-YPR053C_FaliES1 rna-NM_001348887.1_FaliES1 cds-NP_001335825.1_FaliES1 99.3 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000446.1:15239-15694:- gene-YPR053C_JAY291 rna-NM_001348887.1_JAY291 cds-NP_001335825.1_JAY291 99.7 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005422.1:656383-656838:- gene-YPR053C_MUCL30387 rna-NM_001348887.1_MUCL30387 cds-NP_001335825.1_MUCL30387 99.5 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005454.1:655087-655542:- gene-YPR053C_MUCL30388 rna-NM_001348887.1_MUCL30388 cds-NP_001335825.1_MUCL30388 99.7 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005294.1:634396-634851:- gene-YPR053C_MUCL39482 rna-NM_001348887.1_MUCL39482 cds-NP_001335825.1_MUCL39482 99.3 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005438.1:697224-697679:- gene-YPR053C_MUCL42920 rna-NM_001348887.1_MUCL42920 cds-NP_001335825.1_MUCL42920 99.7 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011825.1:665771-666226:- gene-YPR053C_NCIM3186 rna-NM_001348887.1_NCIM3186 cds-NP_001335825.1_NCIM3186 99.3 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005278.1:642326-642781:- gene-YPR053C_NCYC1407 rna-NM_001348887.1_NCYC1407 cds-NP_001335825.1_NCYC1407 99.3 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994155.1:648542-648997:- gene-YPR053C_PE2H3 rna-NM_001348887.1_PE2H3 cds-NP_001335825.1_PE2H3 99.7 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999887.1:648190-648645:- gene-YPR053C_PE2H4 rna-NM_001348887.1_PE2H4 cds-NP_001335825.1_PE2H4 99.7 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001148.4:665788-666243:- gene-YPR053C_S288C rna-NM_001348887.1_S288C cds-NP_001335825.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000026.1:34448-34903:+ gene-YPR053C_SA1 rna-NM_001348887.1_SA1 cds-NP_001335825.1_SA1 99.7 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005502.1:643056-643511:- gene-YPR053C_ThermosaccDry rna-NM_001348887.1_ThermosaccDry cds-NP_001335825.1_ThermosaccDry 99.3 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005470.1:659215-659670:- gene-YPR053C_VR1 rna-NM_001348887.1_VR1 cds-NP_001335825.1_VR1 99.7 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000033.1:642287-642742:- gene-YPR053C_ZTW1 rna-NM_001348887.1_ZTW1 cds-NP_001335825.1_ZTW1 99.5 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047502.1:643082-643537:- gene-YPR053C_Sparadoxus rna-NM_001348887.1_Sparadoxus cds-NP_001335825.1_Sparadoxus 95.3 100.0 Unannotated 1 1 0 False False False False True

Additional files