Gene name: YPR027C
Reference locus (S288C): YPR027C
Gene biotype: protein_coding
Description: Uncharacterized membrane protein YPR027C; Putative protein of unknown function; SWAT-GFP and seamless-GFP fusion proteins localize to the endoplasmic reticulum, while the mCherry fusion protein localizes to the vacuole
Top 10 interactors (score): YIR040C (0.945); YLR296W (0.945); YDR215C (0.942); YBL044W (0.932)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:592049-592882:- | gene-YPR027C_AKU4011 | rna-NM_001184124.1_AKU4011 | cds-NP_015352.1_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:304745-305578:+ | gene-YPR027C_BG1 | rna-NM_001184124.1_BG1 | cds-NP_015352.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:669705-670538:- | gene-YPR027C_Bruggeman | rna-NM_001184124.1_Bruggeman | cds-NP_015352.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:712711-713544:- | gene-YPR027C_CAT1 | rna-NM_001184124.1_CAT1 | cds-NP_015352.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:595733-596566:- | gene-YPR027C_CBS1585 | rna-NM_001184124.1_CBS1585 | cds-NP_015352.1_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:610133-610966:- | gene-YPR027C_CBS436 | rna-NM_001184124.1_CBS436 | cds-NP_015352.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:599481-600314:- | gene-YPR027C_CBS6412 | rna-NM_001184124.1_CBS6412 | cds-NP_015352.1_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:592198-593031:- | gene-YPR027C_CBS6413 | rna-NM_001184124.1_CBS6413 | cds-NP_015352.1_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:620398-621231:- | gene-YPR027C_CENPK1137D | rna-NM_001184124.1_CENPK1137D | cds-NP_015352.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:589983-590816:- | gene-YPR027C_EthanolRed | rna-NM_001184124.1_EthanolRed | cds-NP_015352.1_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:597786-598619:- | gene-YPR027C_FaliES1 | rna-NM_001184124.1_FaliES1 | cds-NP_015352.1_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000116.1:29281-30114:+ | gene-YPR027C_JAY291 | rna-NM_001184124.1_JAY291 | cds-NP_015352.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:610927-611760:- | gene-YPR027C_MUCL30387 | rna-NM_001184124.1_MUCL30387 | cds-NP_015352.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:609605-610438:- | gene-YPR027C_MUCL30388 | rna-NM_001184124.1_MUCL30388 | cds-NP_015352.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:588990-589823:- | gene-YPR027C_MUCL39482 | rna-NM_001184124.1_MUCL39482 | cds-NP_015352.1_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:651800-652633:- | gene-YPR027C_MUCL42920 | rna-NM_001184124.1_MUCL42920 | cds-NP_015352.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:620408-621241:- | gene-YPR027C_NCIM3186 | rna-NM_001184124.1_NCIM3186 | cds-NP_015352.1_NCIM3186 | 98.3 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:596921-597754:- | gene-YPR027C_NCYC1407 | rna-NM_001184124.1_NCYC1407 | cds-NP_015352.1_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:603160-603993:- | gene-YPR027C_PE2H3 | rna-NM_001184124.1_PE2H3 | cds-NP_015352.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:602808-603641:- | gene-YPR027C_PE2H4 | rna-NM_001184124.1_PE2H4 | cds-NP_015352.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:620425-621258:- | gene-YPR027C_S288C | rna-NM_001184124.1_S288C | cds-NP_015352.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000026.1:79533-80366:+ | gene-YPR027C_SA1 | rna-NM_001184124.1_SA1 | cds-NP_015352.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:597586-598419:- | gene-YPR027C_ThermosaccDry | rna-NM_001184124.1_ThermosaccDry | cds-NP_015352.1_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:613846-614679:- | gene-YPR027C_VR1 | rna-NM_001184124.1_VR1 | cds-NP_015352.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:596905-597738:- | gene-YPR027C_ZTW1 | rna-NM_001184124.1_ZTW1 | cds-NP_015352.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:597512-598345:- | gene-YPR027C_Sparadoxus | rna-NM_001184124.1_Sparadoxus | cds-NP_015352.1_Sparadoxus | 89.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |