Gene name: YPR015C
Reference locus (S288C): YPR015C
Gene biotype: protein_coding
Description: Putative zinc finger transcription factor; binds DNA in sequence-specific manner; overexpression causes a cell cycle delay or arrest
Top 10 interactors (score): COM2 (0.676); USV1 (0.619); ZRT1 (0.614); ZRT2 (0.614); YGR067C (0.614); HMRA2 (0.609); HOS3 (0.579); ZRT3 (0.576); RNR2 (0.575); RNR4 (0.572); TOG1 (0.57); TDA9 (0.568); AVO2 (0.567); RNR3 (0.565); YNL194C (0.564); SLT2 (0.548); GCD1 (0.546); YDR248C (0.525); SDD4 (0.521); CTF4 (0.516)
Homologues (species, bitscore): KLF9 (Homo sapiens, 62.0); Zfp42 (Mus musculus, 62.8); ZNF408 (Danio rerio, 60.8); klf9 (Xenopus tropicalis, 63.5); wor (Drosophila melanogaster, 61.6); sptf-3 (Caenorhabditis elegans, 57.8); YY1 (Arabidopsis thaliana, 53.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:561947-562690:- | gene-YPR015C_AKU4011 | rna-NM_001184112.1_AKU4011 | cds-NP_015340.1_AKU4011 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:334455-335198:+ | gene-YPR015C_BG1 | rna-NM_001184112.1_BG1 | cds-NP_015340.1_BG1 | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:639606-640349:- | gene-YPR015C_Bruggeman | rna-NM_001184112.1_Bruggeman | cds-NP_015340.1_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:683104-683847:- | gene-YPR015C_CAT1 | rna-NM_001184112.1_CAT1 | cds-NP_015340.1_CAT1 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:565633-566376:- | gene-YPR015C_CBS1585 | rna-NM_001184112.1_CBS1585 | cds-NP_015340.1_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:579999-580742:- | gene-YPR015C_CBS436 | rna-NM_001184112.1_CBS436 | cds-NP_015340.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:569382-570125:- | gene-YPR015C_CBS6412 | rna-NM_001184112.1_CBS6412 | cds-NP_015340.1_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:562095-562838:- | gene-YPR015C_CBS6413 | rna-NM_001184112.1_CBS6413 | cds-NP_015340.1_CBS6413 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:590257-591000:- | gene-YPR015C_CENPK1137D | rna-NM_001184112.1_CENPK1137D | cds-NP_015340.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:559887-560630:- | gene-YPR015C_EthanolRed | rna-NM_001184112.1_EthanolRed | cds-NP_015340.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:567689-568432:- | gene-YPR015C_FaliES1 | rna-NM_001184112.1_FaliES1 | cds-NP_015340.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000337.1:29494-30237:- | gene-YPR015C_JAY291 | rna-NM_001184112.1_JAY291 | cds-NP_015340.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:580826-581569:- | gene-YPR015C_MUCL30387 | rna-NM_001184112.1_MUCL30387 | cds-NP_015340.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:579479-580222:- | gene-YPR015C_MUCL30388 | rna-NM_001184112.1_MUCL30388 | cds-NP_015340.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:558872-559615:- | gene-YPR015C_MUCL39482 | rna-NM_001184112.1_MUCL39482 | cds-NP_015340.1_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:620203-620946:- | gene-YPR015C_MUCL42920 | rna-NM_001184112.1_MUCL42920 | cds-NP_015340.1_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:590266-591009:- | gene-YPR015C_NCIM3186 | rna-NM_001184112.1_NCIM3186 | cds-NP_015340.1_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:566821-567564:- | gene-YPR015C_NCYC1407 | rna-NM_001184112.1_NCYC1407 | cds-NP_015340.1_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:573542-574285:- | gene-YPR015C_PE2H3 | rna-NM_001184112.1_PE2H3 | cds-NP_015340.1_PE2H3 | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:573157-573900:- | gene-YPR015C_PE2H4 | rna-NM_001184112.1_PE2H4 | cds-NP_015340.1_PE2H4 | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:590283-591026:- | gene-YPR015C_S288C | rna-NM_001184112.1_S288C | cds-NP_015340.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000026.1:109289-110032:+ | gene-YPR015C_SA1 | rna-NM_001184112.1_SA1 | cds-NP_015340.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:567488-568231:- | gene-YPR015C_ThermosaccDry | rna-NM_001184112.1_ThermosaccDry | cds-NP_015340.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:583694-584437:- | gene-YPR015C_VR1 | rna-NM_001184112.1_VR1 | cds-NP_015340.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:566793-567536:- | gene-YPR015C_ZTW1 | rna-NM_001184112.1_ZTW1 | cds-NP_015340.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:566947-567690:- | gene-YPR015C_Sparadoxus | rna-NM_001184112.1_Sparadoxus | cds-NP_015340.1_Sparadoxus | 91.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |