Gene name: YPQ2
Reference locus (S288C): YDR352W
Gene biotype: protein_coding
Description: Putative vacuolar membrane transporter for cationic amino acids; likely contributes to amino acid homeostasis by exporting cationic amino acids from the vacuole; member of the PQ-loop family, with seven transmembrane domains; mutant phenotype is functionally complemented by rat PQLC2 vacuolar transporter; Belongs to the laat-1 family
Top 10 interactors (score): ERS1 (0.822); NCR1 (0.816); YPL162C (0.766); YDR090C (0.745); ANY1 (0.744); SNA2 (0.718); SNA4 (0.695); VBA4 (0.692); SSH4 (0.65); FTH1 (0.631); OCA2 (0.619); PMC1 (0.584); AVT1 (0.571); TUL1 (0.568); MPC2 (0.561); MPC3 (0.499); VCX1 (0.487); SEC7 (0.481); ZRT3 (0.454); COT1 (0.453)
Homologues (species, bitscore): PQLC2 (Homo sapiens, 94.0); Pqlc2 (Mus musculus, 84.0); pqlc2 (Danio rerio, 92.8); C3orf55 (Xenopus tropicalis, 102.1); Y43H11AL.2 (Caenorhabditis elegans, 104.4); AT4G20100 (Arabidopsis thaliana, 93.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:1127865-1128818:+ | gene-YDR352W_AKU4011 | rna-NM_001180660.1_AKU4011 | cds-NP_010639.1_AKU4011 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000039.1:6413-7366:+ | gene-YDR352W_BG1 | rna-NM_001180660.1_BG1 | cds-NP_010639.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1158518-1159471:+ | gene-YDR352W_Bruggeman | rna-NM_001180660.1_Bruggeman | cds-NP_010639.1_Bruggeman | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1137107-1138060:+ | gene-YDR352W_CAT1 | rna-NM_001180660.1_CAT1 | cds-NP_010639.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1122582-1123535:+ | gene-YDR352W_CBS1585 | rna-NM_001180660.1_CBS1585 | cds-NP_010639.1_CBS1585 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1141164-1142117:+ | gene-YDR352W_CBS436 | rna-NM_001180660.1_CBS436 | cds-NP_010639.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:1118842-1119795:+ | gene-YDR352W_CBS6412 | rna-NM_001180660.1_CBS6412 | cds-NP_010639.1_CBS6412 | 98.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1140732-1141685:+ | gene-YDR352W_CBS6413 | rna-NM_001180660.1_CBS6413 | cds-NP_010639.1_CBS6413 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1180447-1181400:+ | gene-YDR352W_CENPK1137D | rna-NM_001180660.1_CENPK1137D | cds-NP_010639.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:1132267-1133220:+ | gene-YDR352W_EthanolRed | rna-NM_001180660.1_EthanolRed | cds-NP_010639.1_EthanolRed | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1135550-1136503:+ | gene-YDR352W_FaliES1 | rna-NM_001180660.1_FaliES1 | cds-NP_010639.1_FaliES1 | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000057.1:54569-55522:- | gene-YDR352W_JAY291 | rna-NM_001180660.1_JAY291 | cds-NP_010639.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1141816-1142769:+ | gene-YDR352W_MUCL30387 | rna-NM_001180660.1_MUCL30387 | cds-NP_010639.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1124422-1125375:+ | gene-YDR352W_MUCL30388 | rna-NM_001180660.1_MUCL30388 | cds-NP_010639.1_MUCL30388 | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:1114116-1115069:+ | gene-YDR352W_MUCL39482 | rna-NM_001180660.1_MUCL39482 | cds-NP_010639.1_MUCL39482 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:1056050-1057003:+ | gene-YDR352W_MUCL42920 | rna-NM_001180660.1_MUCL42920 | cds-NP_010639.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1181724-1182677:+ | gene-YDR352W_NCIM3186 | rna-NM_001180660.1_NCIM3186 | cds-NP_010639.1_NCIM3186 | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:1127789-1128742:+ | gene-YDR352W_NCYC1407 | rna-NM_001180660.1_NCYC1407 | cds-NP_010639.1_NCYC1407 | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1138216-1139169:+ | gene-YDR352W_PE2H3 | rna-NM_001180660.1_PE2H3 | cds-NP_010639.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1143801-1144754:+ | gene-YDR352W_PE2H4 | rna-NM_001180660.1_PE2H4 | cds-NP_010639.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1181801-1182754:+ | gene-YDR352W_S288C | rna-NM_001180660.1_S288C | cds-NP_010639.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000072.1:6494-7447:+ | gene-YDR352W_SA1 | rna-NM_001180660.1_SA1 | cds-NP_010639.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1139831-1140784:+ | gene-YDR352W_ThermosaccDry | rna-NM_001180660.1_ThermosaccDry | cds-NP_010639.1_ThermosaccDry | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:567180-568133:+ | gene-YDR352W_VR1 | rna-NM_001180660.1_VR1 | cds-NP_010639.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:182667-183620:+ | gene-YDR352W_ZTW1 | rna-NM_001180660.1_ZTW1 | cds-NP_010639.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1133748-1134692:+ | gene-YDR352W_Sparadoxus | rna-NM_001180660.1_Sparadoxus | cds-NP_010639.1_Sparadoxus | 89.4 | 99.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |