Gene name: YPQ1
Reference locus (S288C): YOL092W
Gene biotype: protein_coding
Description: Putative vacuolar membrane transporter for cationic amino acids; likely contributes to amino acid homeostasis by exporting cationic amino acids from the vacuole; member of the PQ-loop family, with seven transmembrane domains; similar to mammalian PQLC2 vacuolar transporter; YPQ1 has a paralog, RTC2, that arose from the whole genome duplication; Belongs to the laat-1 family
Top 10 interactors (score): ERS1 (0.883); SSH4 (0.749); NCR1 (0.711); AVT1 (0.703); COT1 (0.675); YPL162C (0.675); TUL1 (0.671); ALP1 (0.617); ANY1 (0.607); MRT4 (0.595); RSP5 (0.595); YDR090C (0.574); VBA4 (0.572); SNA2 (0.572); VBA5 (0.57); AVT3 (0.554); RUP1 (0.522); PEP12 (0.52); ELP2 (0.518); ZRT3 (0.499)
Homologues (species, bitscore): PQLC2 (Homo sapiens, 99.4); Pqlc2 (Mus musculus, 89.0); pqlc2 (Danio rerio, 106.7); C3orf55 (Xenopus tropicalis, 97.8); Y43H11AL.2 (Caenorhabditis elegans, 115.5); AT4G36850 (Arabidopsis thaliana, 119.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:127523-128449:+ | gene-YOL092W_AKU4011 | rna-NM_001183346.1_AKU4011 | cds-NP_014549.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000172.1:92632-93558:+ | gene-YOL092W_BG1 | rna-NM_001183346.1_BG1 | cds-NP_014549.1_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:129100-130026:+ | gene-YOL092W_Bruggeman | rna-NM_001183346.1_Bruggeman | cds-NP_014549.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:127980-128906:+ | gene-YOL092W_CAT1 | rna-NM_001183346.1_CAT1 | cds-NP_014549.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:121962-122888:+ | gene-YOL092W_CBS1585 | rna-NM_001183346.1_CBS1585 | cds-NP_014549.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:127239-128165:+ | gene-YOL092W_CBS436 | rna-NM_001183346.1_CBS436 | cds-NP_014549.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:122124-123050:+ | gene-YOL092W_CBS6412 | rna-NM_001183346.1_CBS6412 | cds-NP_014549.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:128825-129751:+ | gene-YOL092W_CBS6413 | rna-NM_001183346.1_CBS6413 | cds-NP_014549.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:138170-139096:+ | gene-YOL092W_CENPK1137D | rna-NM_001183346.1_CENPK1137D | cds-NP_014549.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:125123-126049:+ | gene-YOL092W_EthanolRed | rna-NM_001183346.1_EthanolRed | cds-NP_014549.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:127450-128376:+ | gene-YOL092W_FaliES1 | rna-NM_001183346.1_FaliES1 | cds-NP_014549.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000160.1:15094-16020:- | gene-YOL092W_JAY291 | rna-NM_001183346.1_JAY291 | cds-NP_014549.1_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:133303-134229:+ | gene-YOL092W_MUCL30387 | rna-NM_001183346.1_MUCL30387 | cds-NP_014549.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:136485-137411:+ | gene-YOL092W_MUCL30388 | rna-NM_001183346.1_MUCL30388 | cds-NP_014549.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:129883-130809:+ | gene-YOL092W_MUCL39482 | rna-NM_001183346.1_MUCL39482 | cds-NP_014549.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:145654-146580:+ | gene-YOL092W_MUCL42920 | rna-NM_001183346.1_MUCL42920 | cds-NP_014549.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:144093-145019:+ | gene-YOL092W_NCIM3186 | rna-NM_001183346.1_NCIM3186 | cds-NP_014549.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:136480-137406:+ | gene-YOL092W_NCYC1407 | rna-NM_001183346.1_NCYC1407 | cds-NP_014549.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:119777-120703:+ | gene-YOL092W_PE2H3 | rna-NM_001183346.1_PE2H3 | cds-NP_014549.1_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:130758-131684:+ | gene-YOL092W_PE2H4 | rna-NM_001183346.1_PE2H4 | cds-NP_014549.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:144204-145130:+ | gene-YOL092W_S288C | rna-NM_001183346.1_S288C | cds-NP_014549.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000001.1:112085-113011:+ | gene-YOL092W_SA1 | rna-NM_001183346.1_SA1 | cds-NP_014549.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:126458-127384:+ | gene-YOL092W_ThermosaccDry | rna-NM_001183346.1_ThermosaccDry | cds-NP_014549.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:127027-127953:+ | gene-YOL092W_VR1 | rna-NM_001183346.1_VR1 | cds-NP_014549.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000031.1:126157-127083:+ | gene-YOL092W_ZTW1 | rna-NM_001183346.1_ZTW1 | cds-NP_014549.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:129616-130542:+ | gene-YOL092W_Sparadoxus | rna-NM_001183346.1_Sparadoxus | cds-NP_014549.1_Sparadoxus | 92.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |