Gene name: YPP1
Reference locus (S288C): YGR198W
Gene biotype: protein_coding
Description: Cargo-transport protein involved in endocytosis; interacts with phosphatidylinositol-4-kinase Stt4p; is required, along with Efr3p, for the assembly and recruitment of multiple copies of the kinase into phosphoinositide kinase (PIK) patches at the plasma membrane; positively regulates Stt4p; GFP-fusion protein localizes to the cytoplasm; YGR198W is an essential gene
Top 10 interactors (score): EFR3 (0.993); STT4 (0.966); SAC1 (0.824); PIK1 (0.762); SFK1 (0.749); OSH3 (0.728); CCZ1 (0.712); PAT1 (0.686); FYV8 (0.673); MSS4 (0.671); OSH2 (0.618); MON1 (0.615); END3 (0.6); GPI16 (0.552); SLA2 (0.546); SLA1 (0.532); SGN1 (0.526); YPK9 (0.504); ACT1 (0.499); HGH1 (0.497)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:860217-862670:+ | gene-YGR198W_AKU4011 | rna-NM_001181327.3_AKU4011 | cds-NP_011714.3_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000021.1:140548-143001:+ | gene-YGR198W_BG1 | rna-NM_001181327.3_BG1 | cds-NP_011714.3_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:868419-870872:+ | gene-YGR198W_Bruggeman | rna-NM_001181327.3_Bruggeman | cds-NP_011714.3_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:866415-868868:+ | gene-YGR198W_CAT1 | rna-NM_001181327.3_CAT1 | cds-NP_011714.3_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:863657-866110:+ | gene-YGR198W_CBS1585 | rna-NM_001181327.3_CBS1585 | cds-NP_011714.3_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:867013-869466:+ | gene-YGR198W_CBS436 | rna-NM_001181327.3_CBS436 | cds-NP_011714.3_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:854528-856981:+ | gene-YGR198W_CBS6412 | rna-NM_001181327.3_CBS6412 | cds-NP_011714.3_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:860586-863039:+ | gene-YGR198W_CBS6413 | rna-NM_001181327.3_CBS6413 | cds-NP_011714.3_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:894419-896872:+ | gene-YGR198W_CENPK1137D | rna-NM_001181327.3_CENPK1137D | cds-NP_011714.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:849037-851490:+ | gene-YGR198W_EthanolRed | rna-NM_001181327.3_EthanolRed | cds-NP_011714.3_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:853428-855881:+ | gene-YGR198W_FaliES1 | rna-NM_001181327.3_FaliES1 | cds-NP_011714.3_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000148.1:11157-13610:+ | gene-YGR198W_JAY291 | rna-NM_001181327.3_JAY291 | cds-NP_011714.3_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:865904-868357:+ | gene-YGR198W_MUCL30387 | rna-NM_001181327.3_MUCL30387 | cds-NP_011714.3_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:865588-868041:+ | gene-YGR198W_MUCL30388 | rna-NM_001181327.3_MUCL30388 | cds-NP_011714.3_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:858731-861184:+ | gene-YGR198W_MUCL39482 | rna-NM_001181327.3_MUCL39482 | cds-NP_011714.3_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:876282-878735:+ | gene-YGR198W_MUCL42920 | rna-NM_001181327.3_MUCL42920 | cds-NP_011714.3_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:894693-897146:+ | gene-YGR198W_NCIM3186 | rna-NM_001181327.3_NCIM3186 | cds-NP_011714.3_NCIM3186 | 69.2 | 82.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:854389-856842:+ | gene-YGR198W_NCYC1407 | rna-NM_001181327.3_NCYC1407 | cds-NP_011714.3_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:878997-881450:+ | gene-YGR198W_PE2H3 | rna-NM_001181327.3_PE2H3 | cds-NP_011714.3_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:884107-886560:+ | gene-YGR198W_PE2H4 | rna-NM_001181327.3_PE2H4 | cds-NP_011714.3_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:894693-897146:+ | gene-YGR198W_S288C | rna-NM_001181327.3_S288C | cds-NP_011714.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000101.1:16148-18601:+ | gene-YGR198W_SA1 | rna-NM_001181327.3_SA1 | cds-NP_011714.3_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:873939-876392:+ | gene-YGR198W_ThermosaccDry | rna-NM_001181327.3_ThermosaccDry | cds-NP_011714.3_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:978427-980880:+ | gene-YGR198W_VR1 | rna-NM_001181327.3_VR1 | cds-NP_011714.3_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000016.1:175388-177841:+ | gene-YGR198W_ZTW1 | rna-NM_001181327.3_ZTW1 | cds-NP_011714.3_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:865997-868450:+ | gene-YGR198W_Sparadoxus | rna-NM_001181327.3_Sparadoxus | cds-NP_011714.3_Sparadoxus | 89.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |