Gene name: YPL257W-B
Reference locus (S288C): YPL257W-B
Gene biotype: protein_coding
Description: Transposon Ty1-PL Gag-Pol polyprotein; Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes
Top 10 interactors (score): Unknown
Homologues (species, bitscore): CRK8 (Arabidopsis thaliana, 91.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CAT1 | GCA_001738705.1 | Bioethanol | South America | MBWC01000332.1:1-536:- | gene-YPL257W-B_CAT1 | rna-NM_001184392.2_CAT1 | cds-NP_058189.1_CAT1 | 10.1 | 10.1 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000150.1:1-1071:- | gene-YPL257W-B_JAY291 | rna-NM_001184392.2_JAY291 | cds-NP_058189.1_JAY291 | 20.2 | 20.3 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:56748-62016:+ | gene-YPL257W-B_S288C | rna-NM_001184392.2_S288C | cds-NP_058189.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000219.1:1-1064:+ | gene-YPL257W-B_SA1 | rna-NM_001184392.2_SA1 | cds-NP_058189.1_SA1 | 20.1 | 20.1 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |