Gene name: YPL247C
Reference locus (S288C): YPL247C
Gene biotype: protein_coding
Description: WD repeat-containing protein YPL247C; Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; similar to the petunia WD repeat protein an11; overexpression causes a cell cycle delay or arrest
Top 10 interactors (score): YAK1 (0.999); IGD1 (0.97); SDS24 (0.883); SET1 (0.878); TSL1 (0.864); SOL4 (0.845); GSY1 (0.844); TPK2 (0.836); GLC3 (0.816); GAD1 (0.81); KNS1 (0.77); TPS2 (0.77); YHR097C (0.747); TPS1 (0.745); HSP42 (0.733); AIM17 (0.732); TFS1 (0.728); PGM2 (0.727); GSY2 (0.725); YLR177W (0.706)
Homologues (species, bitscore): DCAF7 (Homo sapiens, 186.0); Dcaf7 (Mus musculus, 186.0); dcaf7 (Danio rerio, 189.9); dcaf7 (Xenopus tropicalis, 188.7); wap (Drosophila melanogaster, 203.4); swan-2 (Caenorhabditis elegans, 194.5); TTG1 (Arabidopsis thaliana, 169.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:60375-61946:- | gene-YPL247C_AKU4011 | rna-NM_001184061.1_AKU4011 | cds-NP_015077.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000184.1:13198-14769:+ | gene-YPL247C_BG1 | rna-NM_001184061.1_BG1 | cds-NP_015077.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:84263-85834:- | gene-YPL247C_Bruggeman | rna-NM_001184061.1_Bruggeman | cds-NP_015077.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:82371-83942:- | gene-YPL247C_CAT1 | rna-NM_001184061.1_CAT1 | cds-NP_015077.1_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:64688-66259:- | gene-YPL247C_CBS1585 | rna-NM_001184061.1_CBS1585 | cds-NP_015077.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:79107-80678:- | gene-YPL247C_CBS436 | rna-NM_001184061.1_CBS436 | cds-NP_015077.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:69852-71423:- | gene-YPL247C_CBS6412 | rna-NM_001184061.1_CBS6412 | cds-NP_015077.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:60838-62409:- | gene-YPL247C_CBS6413 | rna-NM_001184061.1_CBS6413 | cds-NP_015077.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:82560-84131:- | gene-YPL247C_CENPK1137D | rna-NM_001184061.1_CENPK1137D | cds-NP_015077.1_CENPK1137D | 99.9 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:59777-61348:- | gene-YPL247C_EthanolRed | rna-NM_001184061.1_EthanolRed | cds-NP_015077.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:66584-68155:- | gene-YPL247C_FaliES1 | rna-NM_001184061.1_FaliES1 | cds-NP_015077.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000264.1:12599-14170:+ | gene-YPL247C_JAY291 | rna-NM_001184061.1_JAY291 | cds-NP_015077.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:77419-78990:- | gene-YPL247C_MUCL30387 | rna-NM_001184061.1_MUCL30387 | cds-NP_015077.1_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:75860-77431:- | gene-YPL247C_MUCL30388 | rna-NM_001184061.1_MUCL30388 | cds-NP_015077.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:57818-59389:- | gene-YPL247C_MUCL39482 | rna-NM_001184061.1_MUCL39482 | cds-NP_015077.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:76689-78260:- | gene-YPL247C_MUCL42920 | rna-NM_001184061.1_MUCL42920 | cds-NP_015077.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:82608-84179:- | gene-YPL247C_NCIM3186 | rna-NM_001184061.1_NCIM3186 | cds-NP_015077.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:64265-65836:- | gene-YPL247C_NCYC1407 | rna-NM_001184061.1_NCYC1407 | cds-NP_015077.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:71987-73558:- | gene-YPL247C_PE2H3 | rna-NM_001184061.1_PE2H3 | cds-NP_015077.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:71630-73201:- | gene-YPL247C_PE2H4 | rna-NM_001184061.1_PE2H4 | cds-NP_015077.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:82625-84196:- | gene-YPL247C_S288C | rna-NM_001184061.1_S288C | cds-NP_015077.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000056.1:24504-26075:- | gene-YPL247C_SA1 | rna-NM_001184061.1_SA1 | cds-NP_015077.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:66585-68156:- | gene-YPL247C_ThermosaccDry | rna-NM_001184061.1_ThermosaccDry | cds-NP_015077.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:306456-308027:- | gene-YPL247C_VR1 | rna-NM_001184061.1_VR1 | cds-NP_015077.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:66130-67701:- | gene-YPL247C_ZTW1 | rna-NM_001184061.1_ZTW1 | cds-NP_015077.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:67673-69244:- | gene-YPL247C_Sparadoxus | rna-NM_001184061.1_Sparadoxus | cds-NP_015077.1_Sparadoxus | 90.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |