Gene name: YPL216W
Reference locus (S288C): YPL216W
Gene biotype: protein_coding
Description: Putative ISWI chromatin-remodeling complex subunit YPL216W; Putative protein of unknown function; not an essential gene; YPL216W has a paralog, ITC1, that arose from the whole genome duplication
Top 10 interactors (score): DPB4 (0.905); ISW1 (0.856); ISW2 (0.799); CHD1 (0.675); SPT16 (0.674); HAP5 (0.653); TOP2 (0.633); SPP1 (0.622); DLS1 (0.61); STH1 (0.605); SNF2 (0.605); RSC8 (0.601); SWI3 (0.601); IRC5 (0.581); RSC6 (0.577); SNF12 (0.577); ARP4 (0.552); ARP7 (0.552); TAF1 (0.55); ADA2 (0.546)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:121711-125001:+ | gene-YPL216W_AKU4011 | rna-NM_001184030.1_AKU4011 | cds-NP_015108.1_AKU4011 | 98.3 | 99.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:327473-330772:+ | gene-YPL216W_BG1 | rna-NM_001184030.1_BG1 | cds-NP_015108.1_BG1 | 99.4 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:146793-150466:+ | gene-YPL216W_Bruggeman | rna-NM_001184030.1_Bruggeman | cds-NP_015108.1_Bruggeman | 89.1 | 99.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:143780-147074:+ | gene-YPL216W_CAT1 | rna-NM_001184030.1_CAT1 | cds-NP_015108.1_CAT1 | 99.3 | 99.5 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:125897-129187:+ | gene-YPL216W_CBS1585 | rna-NM_001184030.1_CBS1585 | cds-NP_015108.1_CBS1585 | 98.3 | 99.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:140311-143610:+ | gene-YPL216W_CBS436 | rna-NM_001184030.1_CBS436 | cds-NP_015108.1_CBS436 | 99.4 | 99.7 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:130700-133990:+ | gene-YPL216W_CBS6412 | rna-NM_001184030.1_CBS6412 | cds-NP_015108.1_CBS6412 | 98.3 | 99.4 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:122074-125364:+ | gene-YPL216W_CBS6413 | rna-NM_001184030.1_CBS6413 | cds-NP_015108.1_CBS6413 | 98.3 | 99.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:143767-147066:+ | gene-YPL216W_CENPK1137D | rna-NM_001184030.1_CENPK1137D | cds-NP_015108.1_CENPK1137D | 99.7 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:120801-124100:+ | gene-YPL216W_EthanolRed | rna-NM_001184030.1_EthanolRed | cds-NP_015108.1_EthanolRed | 98.6 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:128007-131306:+ | gene-YPL216W_FaliES1 | rna-NM_001184030.1_FaliES1 | cds-NP_015108.1_FaliES1 | 98.6 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000069.1:27002-30319:- | gene-YPL216W_JAY291 | rna-NM_001184030.1_JAY291 | cds-NP_015108.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:138876-142175:+ | gene-YPL216W_MUCL30387 | rna-NM_001184030.1_MUCL30387 | cds-NP_015108.1_MUCL30387 | 99.0 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:137067-140366:+ | gene-YPL216W_MUCL30388 | rna-NM_001184030.1_MUCL30388 | cds-NP_015108.1_MUCL30388 | 98.9 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:119027-122317:+ | gene-YPL216W_MUCL39482 | rna-NM_001184030.1_MUCL39482 | cds-NP_015108.1_MUCL39482 | 98.3 | 99.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:137901-141200:+ | gene-YPL216W_MUCL42920 | rna-NM_001184030.1_MUCL42920 | cds-NP_015108.1_MUCL42920 | 99.5 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:143804-147112:+ | gene-YPL216W_NCIM3186 | rna-NM_001184030.1_NCIM3186 | cds-NP_015108.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:125475-128765:+ | gene-YPL216W_NCYC1407 | rna-NM_001184030.1_NCYC1407 | cds-NP_015108.1_NCYC1407 | 98.3 | 99.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:133155-136472:+ | gene-YPL216W_PE2H3 | rna-NM_001184030.1_PE2H3 | cds-NP_015108.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:132798-136115:+ | gene-YPL216W_PE2H4 | rna-NM_001184030.1_PE2H4 | cds-NP_015108.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:143821-147129:+ | gene-YPL216W_S288C | rna-NM_001184030.1_S288C | cds-NP_015108.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000095.1:27052-30351:- | gene-YPL216W_SA1 | rna-NM_001184030.1_SA1 | cds-NP_015108.1_SA1 | 99.4 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:127788-131087:+ | gene-YPL216W_ThermosaccDry | rna-NM_001184030.1_ThermosaccDry | cds-NP_015108.1_ThermosaccDry | 98.6 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:141854-145153:+ | gene-YPL216W_VR1 | rna-NM_001184030.1_VR1 | cds-NP_015108.1_VR1 | 99.5 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:127326-130616:+ | gene-YPL216W_ZTW1 | rna-NM_001184030.1_ZTW1 | cds-NP_015108.1_ZTW1 | 98.3 | 99.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:128916-132195:+ | gene-YPL216W_Sparadoxus | rna-NM_001184030.1_Sparadoxus | cds-NP_015108.1_Sparadoxus | 80.4 | 99.1 | Verified | 1 | 1 | 0 | False | False | False | True | False |