Gene name: YPL199C
Reference locus (S288C): YPL199C
Gene biotype: protein_coding
Description: Smr domain-containing protein YPL199C; Putative protein of unknown function; predicted to be palmitoylated
Top 10 interactors (score): ENV7 (0.964); ANR2 (0.934); AKR1 (0.892); LCB4 (0.888); AKR2 (0.877); SNA4 (0.821); YCK2 (0.793); PFA5 (0.755); MEH1 (0.748); YCK1 (0.734); PFA3 (0.712); YGR130C (0.711); SWF1 (0.701); PFA4 (0.7); YCK3 (0.698); VAC8 (0.554); LCB5 (0.526); PSR1 (0.524); APD1 (0.495); OXP1 (0.495)
Homologues (species, bitscore): N4BP2 (Homo sapiens, 62.8); N4bp2 (Mus musculus, 65.5); n4bp2 (Danio rerio, 61.6); AT5G58720 (Arabidopsis thaliana, 56.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:149884-150606:- | gene-YPL199C_AKU4011 | rna-NM_001184013.1_AKU4011 | cds-NP_015125.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:355672-356394:- | gene-YPL199C_BG1 | rna-NM_001184013.1_BG1 | cds-NP_015125.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:175370-176092:- | gene-YPL199C_Bruggeman | rna-NM_001184013.1_Bruggeman | cds-NP_015125.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:171974-172696:- | gene-YPL199C_CAT1 | rna-NM_001184013.1_CAT1 | cds-NP_015125.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:154072-154794:- | gene-YPL199C_CBS1585 | rna-NM_001184013.1_CBS1585 | cds-NP_015125.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:168514-169236:- | gene-YPL199C_CBS436 | rna-NM_001184013.1_CBS436 | cds-NP_015125.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:158873-159595:- | gene-YPL199C_CBS6412 | rna-NM_001184013.1_CBS6412 | cds-NP_015125.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:150245-150967:- | gene-YPL199C_CBS6413 | rna-NM_001184013.1_CBS6413 | cds-NP_015125.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:171980-172702:- | gene-YPL199C_CENPK1137D | rna-NM_001184013.1_CENPK1137D | cds-NP_015125.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:149003-149725:- | gene-YPL199C_EthanolRed | rna-NM_001184013.1_EthanolRed | cds-NP_015125.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:156209-156931:- | gene-YPL199C_FaliES1 | rna-NM_001184013.1_FaliES1 | cds-NP_015125.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000069.1:1373-2095:+ | gene-YPL199C_JAY291 | rna-NM_001184013.1_JAY291 | cds-NP_015125.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:167082-167804:- | gene-YPL199C_MUCL30387 | rna-NM_001184013.1_MUCL30387 | cds-NP_015125.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:165250-165972:- | gene-YPL199C_MUCL30388 | rna-NM_001184013.1_MUCL30388 | cds-NP_015125.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:147202-147924:- | gene-YPL199C_MUCL39482 | rna-NM_001184013.1_MUCL39482 | cds-NP_015125.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:166104-166826:- | gene-YPL199C_MUCL42920 | rna-NM_001184013.1_MUCL42920 | cds-NP_015125.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:172016-172738:- | gene-YPL199C_NCIM3186 | rna-NM_001184013.1_NCIM3186 | cds-NP_015125.1_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:153649-154371:- | gene-YPL199C_NCYC1407 | rna-NM_001184013.1_NCYC1407 | cds-NP_015125.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:161384-162106:- | gene-YPL199C_PE2H3 | rna-NM_001184013.1_PE2H3 | cds-NP_015125.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:161027-161749:- | gene-YPL199C_PE2H4 | rna-NM_001184013.1_PE2H4 | cds-NP_015125.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:172033-172755:- | gene-YPL199C_S288C | rna-NM_001184013.1_S288C | cds-NP_015125.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000095.1:1430-2152:+ | gene-YPL199C_SA1 | rna-NM_001184013.1_SA1 | cds-NP_015125.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:155990-156712:- | gene-YPL199C_ThermosaccDry | rna-NM_001184013.1_ThermosaccDry | cds-NP_015125.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:170914-171636:- | gene-YPL199C_VR1 | rna-NM_001184013.1_VR1 | cds-NP_015125.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:155508-156230:- | gene-YPL199C_ZTW1 | rna-NM_001184013.1_ZTW1 | cds-NP_015125.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:157051-157773:- | gene-YPL199C_Sparadoxus | rna-NM_001184013.1_Sparadoxus | cds-NP_015125.1_Sparadoxus | 90.4 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |