YPL080C (YPL080C)

Gene profile

Gene name: YPL080C
Reference locus (S288C): YPL080C
Gene biotype: protein_coding

Description: Uncharacterized protein YPL080C; Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005310.1:383895-384221:- gene-YPL080C_AKU4011 rna-NM_001348884.1_AKU4011 cds-NP_001335822.1_AKU4011 99.3 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000069.1:589574-589900:- gene-YPL080C_BG1 rna-NM_001348884.1_BG1 cds-NP_001335822.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005518.1:460218-460544:- gene-YPL080C_Bruggeman rna-NM_001348884.1_Bruggeman cds-NP_001335822.1_Bruggeman 99.6 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005534.1:500582-500908:- gene-YPL080C_CAT1 rna-NM_001348884.1_CAT1 cds-NP_001335822.1_CAT1 99.6 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005374.1:387966-388292:- gene-YPL080C_CBS1585 rna-NM_001348884.1_CBS1585 cds-NP_001335822.1_CBS1585 99.0 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005358.1:402525-402851:- gene-YPL080C_CBS436 rna-NM_001348884.1_CBS436 cds-NP_001335822.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005342.1:392157-392483:- gene-YPL080C_CBS6412 rna-NM_001348884.1_CBS6412 cds-NP_001335822.1_CBS6412 99.3 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005326.1:384518-384844:- gene-YPL080C_CBS6413 rna-NM_001348884.1_CBS6413 cds-NP_001335822.1_CBS6413 99.3 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001537.1:406141-406467:- gene-YPL080C_CENPK1137D rna-NM_001348884.1_CENPK1137D cds-NP_001335822.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005486.1:382263-382589:- gene-YPL080C_EthanolRed rna-NM_001348884.1_EthanolRed cds-NP_001335822.1_EthanolRed 99.3 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005550.1:390093-390419:- gene-YPL080C_FaliES1 rna-NM_001348884.1_FaliES1 cds-NP_001335822.1_FaliES1 99.3 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000350.1:810-1136:+ gene-YPL080C_JAY291 rna-NM_001348884.1_JAY291 cds-NP_001335822.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005422.1:401049-401375:- gene-YPL080C_MUCL30387 rna-NM_001348884.1_MUCL30387 cds-NP_001335822.1_MUCL30387 99.6 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005454.1:399850-400176:- gene-YPL080C_MUCL30388 rna-NM_001348884.1_MUCL30388 cds-NP_001335822.1_MUCL30388 99.3 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005294.1:381295-381621:- gene-YPL080C_MUCL39482 rna-NM_001348884.1_MUCL39482 cds-NP_001335822.1_MUCL39482 99.0 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005438.1:439156-439482:- gene-YPL080C_MUCL42920 rna-NM_001348884.1_MUCL42920 cds-NP_001335822.1_MUCL42920 99.6 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011825.1:406155-406481:- gene-YPL080C_NCIM3186 rna-NM_001348884.1_NCIM3186 cds-NP_001335822.1_NCIM3186 98.4 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005278.1:387904-388230:- gene-YPL080C_NCYC1407 rna-NM_001348884.1_NCYC1407 cds-NP_001335822.1_NCYC1407 99.3 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994155.1:395185-395511:- gene-YPL080C_PE2H3 rna-NM_001348884.1_PE2H3 cds-NP_001335822.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999887.1:394808-395134:- gene-YPL080C_PE2H4 rna-NM_001348884.1_PE2H4 cds-NP_001335822.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001148.4:406172-406498:- gene-YPL080C_S288C rna-NM_001348884.1_S288C cds-NP_001335822.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000057.1:28283-28609:- gene-YPL080C_SA1 rna-NM_001348884.1_SA1 cds-NP_001335822.1_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005502.1:389893-390219:- gene-YPL080C_ThermosaccDry rna-NM_001348884.1_ThermosaccDry cds-NP_001335822.1_ThermosaccDry 99.3 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005470.1:404894-405220:- gene-YPL080C_VR1 rna-NM_001348884.1_VR1 cds-NP_001335822.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000033.1:389202-389528:- gene-YPL080C_ZTW1 rna-NM_001348884.1_ZTW1 cds-NP_001335822.1_ZTW1 99.3 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047502.1:390871-391198:- gene-YPL080C_Sparadoxus rna-NM_001348884.1_Sparadoxus cds-NP_001335822.1_Sparadoxus 75.1 95.7 Unannotated 1 1 0 False False False True False

Additional files