Gene name: YPK9
Reference locus (S288C): YOR291W
Gene biotype: protein_coding
Description: Vacuolar cation-transporting ATPase YPK9; Vacuolar protein with a possible role in sequestering heavy metals; has similarity to the type V P-type ATPase Spf1p; homolog of human ATP13A2 (PARK9), mutations in which are associated with Parkinson disease and Kufor-Rakeb syndrome; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily
Top 10 interactors (score): PCA1 (0.845); SMF2 (0.803); VPS35 (0.799); TDA4 (0.775); YPR114W (0.775); BET2 (0.772); ALG1 (0.768); SWF1 (0.757); CYR1 (0.743); YPT1 (0.701); OXR1 (0.682); APQ12 (0.682); SIF2 (0.682); GLO3 (0.68); SMF1 (0.669); INP53 (0.654); MCD1 (0.651); CCC1 (0.65); MIX17 (0.647); APC5 (0.621)
Homologues (species, bitscore): ATP13A3 (Homo sapiens, 713.8); Atp13a3 (Mus musculus, 723.8); atp13a2 (Danio rerio, 681.0); atp13a3 (Xenopus tropicalis, 654.4); CG32000 (Drosophila melanogaster, 621.7); catp-6 (Caenorhabditis elegans, 610.1); PDR2 (Arabidopsis thaliana, 300.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:851634-856052:+ | gene-YOR291W_AKU4011 | rna-NM_001183710.1_AKU4011 | cds-NP_014934.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000123.1:253649-258064:+ | gene-YOR291W_BG1 | rna-NM_001183710.1_BG1 | cds-NP_014934.1_BG1 | 99.4 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:837078-841496:+ | gene-YOR291W_Bruggeman | rna-NM_001183710.1_Bruggeman | cds-NP_014934.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:837803-842221:+ | gene-YOR291W_CAT1 | rna-NM_001183710.1_CAT1 | cds-NP_014934.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:835468-839886:+ | gene-YOR291W_CBS1585 | rna-NM_001183710.1_CBS1585 | cds-NP_014934.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:833311-837729:+ | gene-YOR291W_CBS436 | rna-NM_001183710.1_CBS436 | cds-NP_014934.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:831166-835584:+ | gene-YOR291W_CBS6412 | rna-NM_001183710.1_CBS6412 | cds-NP_014934.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:840361-844779:+ | gene-YOR291W_CBS6413 | rna-NM_001183710.1_CBS6413 | cds-NP_014934.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:860964-865382:+ | gene-YOR291W_CENPK1137D | rna-NM_001183710.1_CENPK1137D | cds-NP_014934.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:827543-831961:+ | gene-YOR291W_EthanolRed | rna-NM_001183710.1_EthanolRed | cds-NP_014934.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:833161-837579:+ | gene-YOR291W_FaliES1 | rna-NM_001183710.1_FaliES1 | cds-NP_014934.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000078.1:165603-170021:- | gene-YOR291W_JAY291 | rna-NM_001183710.1_JAY291 | cds-NP_014934.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:841320-845738:+ | gene-YOR291W_MUCL30387 | rna-NM_001183710.1_MUCL30387 | cds-NP_014934.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:849305-853723:+ | gene-YOR291W_MUCL30388 | rna-NM_001183710.1_MUCL30388 | cds-NP_014934.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:841996-846414:+ | gene-YOR291W_MUCL39482 | rna-NM_001183710.1_MUCL39482 | cds-NP_014934.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:851494-855912:+ | gene-YOR291W_MUCL42920 | rna-NM_001183710.1_MUCL42920 | cds-NP_014934.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:861064-865482:+ | gene-YOR291W_NCIM3186 | rna-NM_001183710.1_NCIM3186 | cds-NP_014934.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:843009-847427:+ | gene-YOR291W_NCYC1407 | rna-NM_001183710.1_NCYC1407 | cds-NP_014934.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:841299-845714:+ | gene-YOR291W_PE2H3 | rna-NM_001183710.1_PE2H3 | cds-NP_014934.1_PE2H3 | 99.4 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:857646-862064:+ | gene-YOR291W_PE2H4 | rna-NM_001183710.1_PE2H4 | cds-NP_014934.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:861175-865593:+ | gene-YOR291W_S288C | rna-NM_001183710.1_S288C | cds-NP_014934.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000006.1:270861-275279:+ | gene-YOR291W_SA1 | rna-NM_001183710.1_SA1 | cds-NP_014934.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:832344-836762:+ | gene-YOR291W_ThermosaccDry | rna-NM_001183710.1_ThermosaccDry | cds-NP_014934.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:895740-900158:+ | gene-YOR291W_VR1 | rna-NM_001183710.1_VR1 | cds-NP_014934.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:565232-569650:+ | gene-YOR291W_ZTW1 | rna-NM_001183710.1_ZTW1 | cds-NP_014934.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:839148-843566:+ | gene-YOR291W_Sparadoxus | rna-NM_001183710.1_Sparadoxus | cds-NP_014934.1_Sparadoxus | 90.0 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |