Gene name: YPD1
Reference locus (S288C): YDL235C
Gene biotype: protein_coding
Description: Osmotic stress-responsive phosphorelay intermediate sensor protein; phosphorylated by the plasma membrane sensor Sln1p in response to osmotic stress and then in turn phosphorylates the response regulators Ssk1p in the cytosol and Skn7p in the nucleus; Belongs to the YPD1 family
Top 10 interactors (score): SSK1 (0.999); SKN7 (0.999); SLN1 (0.999); PBS2 (0.995); HOG1 (0.995); SSK2 (0.988); SSK22 (0.976); SHO1 (0.967); STE11 (0.927); PTC1 (0.853); CDC42 (0.846); PTP2 (0.841); PTP3 (0.814); HKR1 (0.814); OPY2 (0.798); MSB2 (0.793); HSF1 (0.789); SKO1 (0.788); STE7 (0.782); STE50 (0.78)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:16576-17079:- | gene-YDL235C_AKU4011 | rna-NM_001180295.1_AKU4011 | cds-NP_010046.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000077.1:49434-49937:+ | gene-YDL235C_BG1 | rna-NM_001180295.1_BG1 | cds-NP_010046.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:32238-32741:- | gene-YDL235C_Bruggeman | rna-NM_001180295.1_Bruggeman | cds-NP_010046.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:35157-35660:- | gene-YDL235C_CAT1 | rna-NM_001180295.1_CAT1 | cds-NP_010046.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:15951-16454:- | gene-YDL235C_CBS1585 | rna-NM_001180295.1_CBS1585 | cds-NP_010046.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:32660-33163:- | gene-YDL235C_CBS436 | rna-NM_001180295.1_CBS436 | cds-NP_010046.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:16397-16900:- | gene-YDL235C_CBS6412 | rna-NM_001180295.1_CBS6412 | cds-NP_010046.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:33336-33839:- | gene-YDL235C_CBS6413 | rna-NM_001180295.1_CBS6413 | cds-NP_010046.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:32383-32886:- | gene-YDL235C_CENPK1137D | rna-NM_001180295.1_CENPK1137D | cds-NP_010046.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:30110-30613:- | gene-YDL235C_EthanolRed | rna-NM_001180295.1_EthanolRed | cds-NP_010046.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:33412-33915:- | gene-YDL235C_FaliES1 | rna-NM_001180295.1_FaliES1 | cds-NP_010046.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000011.1:10608-11111:+ | gene-YDL235C_JAY291 | rna-NM_001180295.1_JAY291 | cds-NP_010046.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:31533-32036:- | gene-YDL235C_MUCL30387 | rna-NM_001180295.1_MUCL30387 | cds-NP_010046.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:21100-21603:- | gene-YDL235C_MUCL30388 | rna-NM_001180295.1_MUCL30388 | cds-NP_010046.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:16545-17048:- | gene-YDL235C_MUCL39482 | rna-NM_001180295.1_MUCL39482 | cds-NP_010046.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:32671-33174:- | gene-YDL235C_MUCL42920 | rna-NM_001180295.1_MUCL42920 | cds-NP_010046.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:33338-33841:- | gene-YDL235C_NCIM3186 | rna-NM_001180295.1_NCIM3186 | cds-NP_010046.1_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:16501-17004:- | gene-YDL235C_NCYC1407 | rna-NM_001180295.1_NCYC1407 | cds-NP_010046.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:23730-24233:- | gene-YDL235C_PE2H3 | rna-NM_001180295.1_PE2H3 | cds-NP_010046.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:23740-24243:- | gene-YDL235C_PE2H4 | rna-NM_001180295.1_PE2H4 | cds-NP_010046.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:33415-33918:- | gene-YDL235C_S288C | rna-NM_001180295.1_S288C | cds-NP_010046.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000107.1:10393-10896:+ | gene-YDL235C_SA1 | rna-NM_001180295.1_SA1 | cds-NP_010046.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:33540-34043:- | gene-YDL235C_ThermosaccDry | rna-NM_001180295.1_ThermosaccDry | cds-NP_010046.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:33466-33969:- | gene-YDL235C_VR1 | rna-NM_001180295.1_VR1 | cds-NP_010046.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:32599-33102:- | gene-YDL235C_ZTW1 | rna-NM_001180295.1_ZTW1 | cds-NP_010046.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:35895-36398:- | gene-YDL235C_Sparadoxus | rna-NM_001180295.1_Sparadoxus | cds-NP_010046.1_Sparadoxus | 93.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |