YOR394C-A (YOR394C-A)

Gene profile

Gene name: YOR394C-A
Reference locus (S288C): YOR394C-A
Gene biotype: protein_coding

Description: Uncharacterized protein YOR394C-A; Protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching

Top 10 interactors (score): YLR466C-A (0.909); YRF1-8 (0.79)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005302.1:539001-539183:- gene-YOR394C-A_AKU4011 rna-NM_001184626.1_AKU4011 cds-NP_878178.1_AKU4011 83.7 98.8 Unannotated 1 1 0 False False False True False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000129.1:2602-2769:- gene-YOR394C-A_BG1 rna-NM_001184626.1_BG1 cds-NP_878178.1_BG1 99.4 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005509.1:1063052-1063232:- gene-YOR394C-A_Bruggeman rna-NM_001184626.1_Bruggeman cds-NP_878178.1_Bruggeman 85.1 99.4 Unannotated 1 1 0 False False False True False
CAT1 GCA_001738705.1 Bioethanol South America CM005533.1:1057177-1057344:- gene-YOR394C-A_CAT1 rna-NM_001184626.1_CAT1 cds-NP_878178.1_CAT1 99.4 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005370.1:1039063-1039242:- gene-YOR394C-A_CBS1585 rna-NM_001184626.1_CBS1585 cds-NP_878178.1_CBS1585 85.6 99.4 Mismatch 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005358.1:420-587:+ gene-YOR394C-A_CBS436 rna-NM_001184626.1_CBS436 cds-NP_878178.1_CBS436 99.4 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005334.1:539216-539382:- gene-YOR394C-A_CBS6412 rna-NM_001184626.1_CBS6412 cds-NP_878178.1_CBS6412 91.7 98.8 Unannotated 1 1 0 False False False True False
CBS6413 GCA_001738265.1 Sake Asia CM005326.1:898963-899159:- gene-YOR394C-A_CBS6413 rna-NM_001184626.1_CBS6413 cds-NP_878178.1_CBS6413 78.6 100.0 Unannotated 1 1 0 False False True False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001536.1:1084013-1084180:- gene-YOR394C-A_CENPK1137D rna-NM_001184626.1_CENPK1137D cds-NP_878178.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005483.1:126-292:+ gene-YOR394C-A_EthanolRed rna-NM_001184626.1_EthanolRed cds-NP_878178.1_EthanolRed 92.2 99.4 Unannotated 1 1 0 False False True False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005547.1:392-558:+ gene-YOR394C-A_FaliES1 rna-NM_001184626.1_FaliES1 cds-NP_878178.1_FaliES1 92.2 99.4 Unannotated 1 1 0 False False True False False
MUCL30387 GCA_001738515.1 Bread Europe MBVX01000137.1:384-564:+ gene-YOR394C-A_MUCL30387 rna-NM_001184626.1_MUCL30387 cds-NP_878178.1_MUCL30387 85.1 99.4 Unannotated 1 1 0 False False False True False
MUCL30388 GCA_001738495.1 Bread Europe CM005452.1:817127-817309:- gene-YOR394C-A_MUCL30388 rna-NM_001184626.1_MUCL30388 cds-NP_878178.1_MUCL30388 85.2 100.0 Unannotated 1 1 0 False False True False False
MUCL39482 GCA_001738235.1 Sake Asia MBVN01000071.1:813-992:- gene-YOR394C-A_MUCL39482 rna-NM_001184626.1_MUCL39482 cds-NP_878178.1_MUCL39482 85.6 99.4 Mismatch 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005434.1:10483-10667:+ gene-YOR394C-A_MUCL42920 rna-NM_001184626.1_MUCL42920 cds-NP_878178.1_MUCL42920 85.9 100.0 Unannotated 1 1 0 False False False True False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011824.1:1084091-1084258:- gene-YOR394C-A_NCIM3186 rna-NM_001184626.1_NCIM3186 cds-NP_878178.1_NCIM3186 100.0 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005268.1:308-473:+ gene-YOR394C-A_NCYC1407 rna-NM_001184626.1_NCYC1407 cds-NP_878178.1_NCYC1407 91.1 98.2 Verified 1 1 0 False False False True False
PE2H3 GCA_905220325.1 Bioethanol South America HG994154.1:1063819-1063986:- gene-YOR394C-A_PE2H3 rna-NM_001184626.1_PE2H3 cds-NP_878178.1_PE2H3 99.4 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999886.1:1080165-1080332:- gene-YOR394C-A_PE2H4 rna-NM_001184626.1_PE2H4 cds-NP_878178.1_PE2H4 99.4 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001147.6:1084202-1084369:- gene-YOR394C-A_S288C rna-NM_001184626.1_S288C cds-NP_878178.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000197.1:563-730:+ gene-YOR394C-A_SA1 rna-NM_001184626.1_SA1 cds-NP_878178.1_SA1 99.4 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia MBWA01000064.1:221-403:+ gene-YOR394C-A_ThermosaccDry rna-NM_001184626.1_ThermosaccDry cds-NP_878178.1_ThermosaccDry 83.7 98.8 Mismatch 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005468.1:802601-802768:- gene-YOR394C-A_VR1 rna-NM_001184626.1_VR1 cds-NP_878178.1_VR1 99.4 100.0 Verified 1 1 1 False True False False False

Additional files