Gene name: YOR343W-B
Reference locus (S288C): YOR343W-B
Gene biotype: protein_coding
Description: Transposon Ty2-OR2 Gag-Pol polyprotein; Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes
Top 10 interactors (score): Unknown
Homologues (species, bitscore): ENSDARP00000105592 (Danio rerio, 52.4); CRK8 (Arabidopsis thaliana, 96.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CAT1 | GCA_001738705.1 | Bioethanol | South America | MBWC01000251.1:1-950:- | gene-YOR343W-B_CAT1 | rna-NM_001184390.4_CAT1 | cds-NP_620389.3_CAT1 | 17.8 | 17.8 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:970467-975780:+ | gene-YOR343W-B_NCIM3186 | rna-NM_001184390.4_NCIM3186 | cds-NP_620389.3_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:233276-238589:- | gene-YOR343W-B_PE2H3 | rna-NM_001184390.4_PE2H3 | cds-NP_620389.3_PE2H3 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:845673-850986:+ | gene-YOR343W-B_PE2H4 | rna-NM_001184390.4_PE2H4 | cds-NP_620389.3_PE2H4 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:970578-975891:+ | gene-YOR343W-B_S288C | rna-NM_001184390.4_S288C | cds-NP_620389.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |