YOR343C (YOR343C)


Gene profile

Gene name: YOR343C
Reference locus (S288C): YOR343C
Gene biotype: protein_coding

Description: Uncharacterized protein YOR343C; Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data

Top 10 interactors (score): YMR265C (0.895); YDR415C (0.895); YDR133C (0.891); YGR182C (0.848); YER053C-A (0.769); YKR011C (0.748); YLR162W (0.748); YDR222W (0.747); LCL1 (0.727); PAU3 (0.696); TIP20 (0.657); RFC4 (0.651); SEC53 (0.572); QCR9 (0.569); RPS8A (0.499); RPS8B (0.485); CYB2 (0.452)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005309.1:958629-958965:- gene-YOR343C_AKU4011 rna-NM_001348881.1_AKU4011 cds-NP_001335819.1_AKU4011 95.8 100.0 Mismatch 1 1 0 False False False True False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000087.1:1895-2221:+ gene-YOR343C_BG1 rna-NM_001348881.1_BG1 cds-NP_001335819.1_BG1 98.7 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005517.1:944028-944364:- gene-YOR343C_Bruggeman rna-NM_001348881.1_Bruggeman cds-NP_001335819.1_Bruggeman 95.8 100.0 Mismatch 1 1 0 False False False True False
CAT1 GCA_001738705.1 Bioethanol South America MBWC01000173.1:2049-2375:+ gene-YOR343C_CAT1 rna-NM_001348881.1_CAT1 cds-NP_001335819.1_CAT1 98.7 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005373.1:942457-942793:- gene-YOR343C_CBS1585 rna-NM_001348881.1_CBS1585 cds-NP_001335819.1_CBS1585 96.1 100.0 Mismatch 1 1 0 False False False True False
CBS436 GCA_001738355.1 Sake Asia CM005357.1:940263-940589:- gene-YOR343C_CBS436 rna-NM_001348881.1_CBS436 cds-NP_001335819.1_CBS436 98.4 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005339.1:172856-173192:- gene-YOR343C_CBS6412 rna-NM_001348881.1_CBS6412 cds-NP_001335819.1_CBS6412 96.1 100.0 Mismatch 1 1 0 False False False True False
CBS6413 GCA_001738265.1 Sake Asia CM005325.1:947310-947646:- gene-YOR343C_CBS6413 rna-NM_001348881.1_CBS6413 cds-NP_001335819.1_CBS6413 95.8 100.0 Mismatch 1 1 0 False False False True False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001536.1:967930-968256:- gene-YOR343C_CENPK1137D rna-NM_001348881.1_CENPK1137D cds-NP_001335819.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005472.1:187492-187828:- gene-YOR343C_EthanolRed rna-NM_001348881.1_EthanolRed cds-NP_001335819.1_EthanolRed 96.1 100.0 Mismatch 1 1 0 False False False True False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005549.1:940164-940500:- gene-YOR343C_FaliES1 rna-NM_001348881.1_FaliES1 cds-NP_001335819.1_FaliES1 96.1 100.0 Mismatch 1 1 0 False False False True False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000078.1:62766-63092:+ gene-YOR343C_JAY291 rna-NM_001348881.1_JAY291 cds-NP_001335819.1_JAY291 98.7 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005421.1:948518-948854:- gene-YOR343C_MUCL30387 rna-NM_001348881.1_MUCL30387 cds-NP_001335819.1_MUCL30387 95.5 100.0 Mismatch 1 1 0 False False False True False
MUCL30388 GCA_001738495.1 Bread Europe CM005453.1:956268-956594:- gene-YOR343C_MUCL30388 rna-NM_001348881.1_MUCL30388 cds-NP_001335819.1_MUCL30388 98.4 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005293.1:948996-949332:- gene-YOR343C_MUCL39482 rna-NM_001348881.1_MUCL39482 cds-NP_001335819.1_MUCL39482 96.1 100.0 Mismatch 1 1 0 False False False True False
MUCL42920 GCA_001738485.1 Bread Europe CM005437.1:958459-958795:- gene-YOR343C_MUCL42920 rna-NM_001348881.1_MUCL42920 cds-NP_001335819.1_MUCL42920 95.5 100.0 Mismatch 1 1 0 False False False True False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011824.1:968037-968363:- gene-YOR343C_NCIM3186 rna-NM_001348881.1_NCIM3186 cds-NP_001335819.1_NCIM3186 98.4 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005277.1:950005-950341:- gene-YOR343C_NCYC1407 rna-NM_001348881.1_NCYC1407 cds-NP_001335819.1_NCYC1407 96.1 100.0 Mismatch 1 1 0 False False False True False
PE2H3 GCA_905220325.1 Bioethanol South America HG994154.1:948248-948574:- gene-YOR343C_PE2H3 rna-NM_001348881.1_PE2H3 cds-NP_001335819.1_PE2H3 98.7 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999886.1:964600-964926:- gene-YOR343C_PE2H4 rna-NM_001348881.1_PE2H4 cds-NP_001335819.1_PE2H4 98.7 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001147.6:968148-968474:- gene-YOR343C_S288C rna-NM_001348881.1_S288C cds-NP_001335819.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000016.1:78566-78892:- gene-YOR343C_SA1 rna-NM_001348881.1_SA1 cds-NP_001335819.1_SA1 97.8 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005501.1:939333-939669:- gene-YOR343C_ThermosaccDry rna-NM_001348881.1_ThermosaccDry cds-NP_001335819.1_ThermosaccDry 96.1 100.0 Mismatch 1 1 0 False False False True False
VR1 GCA_001738595.1 Bioethanol South America CM005469.1:1002643-1002969:- gene-YOR343C_VR1 rna-NM_001348881.1_VR1 cds-NP_001335819.1_VR1 98.7 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000032.1:672230-672566:- gene-YOR343C_ZTW1 rna-NM_001348881.1_ZTW1 cds-NP_001335819.1_ZTW1 96.1 100.0 Mismatch 1 1 0 False False False True False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047501.1:946586-946915:- gene-YOR343C_Sparadoxus rna-NM_001348881.1_Sparadoxus cds-NP_001335819.1_Sparadoxus 79.6 95.7 Unannotated 1 1 0 False False True False False

Additional files