Gene name: YOR342C
Reference locus (S288C): YOR342C
Gene biotype: protein_coding
Description: Uncharacterized protein YOR342C; Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus; relocalizes from nucleus to cytoplasm upon DNA replication stress; YOR342C has a paralog, YAL037W, that arose from the whole genome duplication
Top 10 interactors (score): NVJ1 (0.748); CIC1 (0.545); KAR5 (0.499); NOC2 (0.472); SHP1 (0.4)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:957146-958105:- | gene-YOR342C_AKU4011 | rna-NM_001183762.1_AKU4011 | cds-NP_014987.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000087.1:2744-3703:+ | gene-YOR342C_BG1 | rna-NM_001183762.1_BG1 | cds-NP_014987.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:942545-943504:- | gene-YOR342C_Bruggeman | rna-NM_001183762.1_Bruggeman | cds-NP_014987.1_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:943282-944241:- | gene-YOR342C_CAT1 | rna-NM_001183762.1_CAT1 | cds-NP_014987.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:940974-941933:- | gene-YOR342C_CBS1585 | rna-NM_001183762.1_CBS1585 | cds-NP_014987.1_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:938781-939740:- | gene-YOR342C_CBS436 | rna-NM_001183762.1_CBS436 | cds-NP_014987.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:171373-172332:- | gene-YOR342C_CBS6412 | rna-NM_001183762.1_CBS6412 | cds-NP_014987.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:945827-946786:- | gene-YOR342C_CBS6413 | rna-NM_001183762.1_CBS6413 | cds-NP_014987.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:966449-967408:- | gene-YOR342C_CENPK1137D | rna-NM_001183762.1_CENPK1137D | cds-NP_014987.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:186009-186968:- | gene-YOR342C_EthanolRed | rna-NM_001183762.1_EthanolRed | cds-NP_014987.1_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:938681-939640:- | gene-YOR342C_FaliES1 | rna-NM_001183762.1_FaliES1 | cds-NP_014987.1_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000078.1:63615-64574:+ | gene-YOR342C_JAY291 | rna-NM_001183762.1_JAY291 | cds-NP_014987.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:947036-947995:- | gene-YOR342C_MUCL30387 | rna-NM_001183762.1_MUCL30387 | cds-NP_014987.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:954786-955745:- | gene-YOR342C_MUCL30388 | rna-NM_001183762.1_MUCL30388 | cds-NP_014987.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:947513-948472:- | gene-YOR342C_MUCL39482 | rna-NM_001183762.1_MUCL39482 | cds-NP_014987.1_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:956976-957935:- | gene-YOR342C_MUCL42920 | rna-NM_001183762.1_MUCL42920 | cds-NP_014987.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:966555-967514:- | gene-YOR342C_NCIM3186 | rna-NM_001183762.1_NCIM3186 | cds-NP_014987.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:948522-949481:- | gene-YOR342C_NCYC1407 | rna-NM_001183762.1_NCYC1407 | cds-NP_014987.1_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:946766-947725:- | gene-YOR342C_PE2H3 | rna-NM_001183762.1_PE2H3 | cds-NP_014987.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:963118-964077:- | gene-YOR342C_PE2H4 | rna-NM_001183762.1_PE2H4 | cds-NP_014987.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:966666-967625:- | gene-YOR342C_S288C | rna-NM_001183762.1_S288C | cds-NP_014987.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000016.1:77083-78042:- | gene-YOR342C_SA1 | rna-NM_001183762.1_SA1 | cds-NP_014987.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:937850-938809:- | gene-YOR342C_ThermosaccDry | rna-NM_001183762.1_ThermosaccDry | cds-NP_014987.1_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:1001161-1002120:- | gene-YOR342C_VR1 | rna-NM_001183762.1_VR1 | cds-NP_014987.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:670747-671706:- | gene-YOR342C_ZTW1 | rna-NM_001183762.1_ZTW1 | cds-NP_014987.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:945115-946074:- | gene-YOR342C_Sparadoxus | rna-NM_001183762.1_Sparadoxus | cds-NP_014987.1_Sparadoxus | 89.3 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |