YOR302W (YOR302W)

Gene profile

Gene name: YOR302W
Reference locus (S288C): YOR302W
Gene biotype: protein_coding

Description: CPA1 uORF; Arginine attenuator peptide, regulates translation of the CPA1 mRNA

Top 10 interactors (score): CPA1 (0.986); CPA2 (0.908); FUR4 (0.868); SPT2 (0.733); FUR1 (0.728); SLY41 (0.672); ARG2 (0.573); COS6 (0.45); LYS14 (0.45)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005309.1:873232-873309:+ gene-YOR302W_AKU4011 rna-NM_001183721.1_AKU4011 cds-NP_014946.1_AKU4011 100.0 100.0 Mismatch 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000123.1:275247-275324:+ gene-YOR302W_BG1 rna-NM_001183721.1_BG1 cds-NP_014946.1_BG1 100.0 100.0 Mismatch 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005517.1:858657-858734:+ gene-YOR302W_Bruggeman rna-NM_001183721.1_Bruggeman cds-NP_014946.1_Bruggeman 100.0 100.0 Mismatch 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005533.1:859398-859475:+ gene-YOR302W_CAT1 rna-NM_001183721.1_CAT1 cds-NP_014946.1_CAT1 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005373.1:857042-857119:+ gene-YOR302W_CBS1585 rna-NM_001183721.1_CBS1585 cds-NP_014946.1_CBS1585 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005357.1:854891-854968:+ gene-YOR302W_CBS436 rna-NM_001183721.1_CBS436 cds-NP_014946.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005341.1:852759-852836:+ gene-YOR302W_CBS6412 rna-NM_001183721.1_CBS6412 cds-NP_014946.1_CBS6412 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005325.1:861887-861964:+ gene-YOR302W_CBS6413 rna-NM_001183721.1_CBS6413 cds-NP_014946.1_CBS6413 100.0 100.0 Mismatch 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001536.1:882553-882630:+ gene-YOR302W_CENPK1137D rna-NM_001183721.1_CENPK1137D cds-NP_014946.1_CENPK1137D 100.0 100.0 Mismatch 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005485.1:849141-849218:+ gene-YOR302W_EthanolRed rna-NM_001183721.1_EthanolRed cds-NP_014946.1_EthanolRed 100.0 100.0 Mismatch 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005549.1:854761-854838:+ gene-YOR302W_FaliES1 rna-NM_001183721.1_FaliES1 cds-NP_014946.1_FaliES1 100.0 100.0 Mismatch 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000078.1:148409-148486:- gene-YOR302W_JAY291 rna-NM_001183721.1_JAY291 cds-NP_014946.1_JAY291 100.0 100.0 Mismatch 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005421.1:862903-862980:+ gene-YOR302W_MUCL30387 rna-NM_001183721.1_MUCL30387 cds-NP_014946.1_MUCL30387 100.0 100.0 Mismatch 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005453.1:870903-870980:+ gene-YOR302W_MUCL30388 rna-NM_001183721.1_MUCL30388 cds-NP_014946.1_MUCL30388 100.0 100.0 Mismatch 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005293.1:863588-863665:+ gene-YOR302W_MUCL39482 rna-NM_001183721.1_MUCL39482 cds-NP_014946.1_MUCL39482 100.0 100.0 Mismatch 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005437.1:873088-873165:+ gene-YOR302W_MUCL42920 rna-NM_001183721.1_MUCL42920 cds-NP_014946.1_MUCL42920 100.0 100.0 Mismatch 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011824.1:882654-882731:+ gene-YOR302W_NCIM3186 rna-NM_001183721.1_NCIM3186 cds-NP_014946.1_NCIM3186 100.0 100.0 Mismatch 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005277.1:864597-864674:+ gene-YOR302W_NCYC1407 rna-NM_001183721.1_NCYC1407 cds-NP_014946.1_NCYC1407 100.0 100.0 Mismatch 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994154.1:862831-862908:+ gene-YOR302W_PE2H3 rna-NM_001183721.1_PE2H3 cds-NP_014946.1_PE2H3 100.0 100.0 Mismatch 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999886.1:879183-879260:+ gene-YOR302W_PE2H4 rna-NM_001183721.1_PE2H4 cds-NP_014946.1_PE2H4 100.0 100.0 Mismatch 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001147.6:882765-882842:+ gene-YOR302W_S288C rna-NM_001183721.1_S288C cds-NP_014946.1_S288C 100.0 100.0 Mismatch 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000090.1:6901-6978:- gene-YOR302W_SA1 rna-NM_001183721.1_SA1 cds-NP_014946.1_SA1 100.0 100.0 Mismatch 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005501.1:853947-854024:+ gene-YOR302W_ThermosaccDry rna-NM_001183721.1_ThermosaccDry cds-NP_014946.1_ThermosaccDry 100.0 100.0 Mismatch 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005469.1:917274-917351:+ gene-YOR302W_VR1 rna-NM_001183721.1_VR1 cds-NP_014946.1_VR1 100.0 100.0 Mismatch 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000032.1:586828-586905:+ gene-YOR302W_ZTW1 rna-NM_001183721.1_ZTW1 cds-NP_014946.1_ZTW1 100.0 100.0 Mismatch 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047501.1:860998-861075:+ gene-YOR302W_Sparadoxus rna-NM_001183721.1_Sparadoxus cds-NP_014946.1_Sparadoxus 98.7 100.0 Mismatch 1 1 1 True True False False False

Additional files