YOR289W (YOR289W)


Gene profile

Gene name: YOR289W
Reference locus (S288C): YOR289W
Gene biotype: protein_coding

Description: Uncharacterized protein YOR289W; Putative protein of unknown function; transcription induced by the unfolded protein response; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus

Top 10 interactors (score): EMC2 (0.962); MSC1 (0.928); DCS2 (0.914); STF2 (0.91); ETR1 (0.905); YML089C (0.893); RTC3 (0.875); TFS1 (0.871); GPG1 (0.857); ULI1 (0.813); YHR138C (0.808); SOL4 (0.807); NNR1 (0.777); MCP1 (0.761); DDR2 (0.758); YMR090W (0.757); AMS1 (0.74); YDL124W (0.736); OM45 (0.733); FMP33 (0.732)

Homologues (species, bitscore): AMMECR1L (Homo sapiens, 112.5); Ammecr1 (Mus musculus, 111.7); ammecr1 (Danio rerio, 114.0); ammecr1l (Xenopus tropicalis, 117.5); CG5902 (Drosophila melanogaster, 107.5); R166.3 (Caenorhabditis elegans, 109.0); AT2G38710 (Arabidopsis thaliana, 120.9)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005309.1:844164-844919:+ gene-YOR289W_AKU4011 rna-NM_001183708.1_AKU4011 cds-NP_014932.1_AKU4011 99.8 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000123.1:246125-246880:+ gene-YOR289W_BG1 rna-NM_001183708.1_BG1 cds-NP_014932.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005517.1:829596-830351:+ gene-YOR289W_Bruggeman rna-NM_001183708.1_Bruggeman cds-NP_014932.1_Bruggeman 100.0 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005533.1:830267-831022:+ gene-YOR289W_CAT1 rna-NM_001183708.1_CAT1 cds-NP_014932.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005373.1:827182-827937:+ gene-YOR289W_CBS1585 rna-NM_001183708.1_CBS1585 cds-NP_014932.1_CBS1585 99.8 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005357.1:825828-826583:+ gene-YOR289W_CBS436 rna-NM_001183708.1_CBS436 cds-NP_014932.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005341.1:824035-824790:+ gene-YOR289W_CBS6412 rna-NM_001183708.1_CBS6412 cds-NP_014932.1_CBS6412 99.8 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005325.1:832893-833648:+ gene-YOR289W_CBS6413 rna-NM_001183708.1_CBS6413 cds-NP_014932.1_CBS6413 99.8 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001536.1:853146-853901:+ gene-YOR289W_CENPK1137D rna-NM_001183708.1_CENPK1137D cds-NP_014932.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005485.1:820291-821046:+ gene-YOR289W_EthanolRed rna-NM_001183708.1_EthanolRed cds-NP_014932.1_EthanolRed 99.8 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005549.1:825690-826445:+ gene-YOR289W_FaliES1 rna-NM_001183708.1_FaliES1 cds-NP_014932.1_FaliES1 99.8 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000381.1:470-1225:- gene-YOR289W_JAY291 rna-NM_001183708.1_JAY291 cds-NP_014932.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005421.1:833834-834589:+ gene-YOR289W_MUCL30387 rna-NM_001183708.1_MUCL30387 cds-NP_014932.1_MUCL30387 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005453.1:841812-842567:+ gene-YOR289W_MUCL30388 rna-NM_001183708.1_MUCL30388 cds-NP_014932.1_MUCL30388 100.0 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005293.1:834528-835283:+ gene-YOR289W_MUCL39482 rna-NM_001183708.1_MUCL39482 cds-NP_014932.1_MUCL39482 99.8 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005437.1:844012-844767:+ gene-YOR289W_MUCL42920 rna-NM_001183708.1_MUCL42920 cds-NP_014932.1_MUCL42920 99.8 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011824.1:853246-854001:+ gene-YOR289W_NCIM3186 rna-NM_001183708.1_NCIM3186 cds-NP_014932.1_NCIM3186 99.7 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005277.1:834733-835488:+ gene-YOR289W_NCYC1407 rna-NM_001183708.1_NCYC1407 cds-NP_014932.1_NCYC1407 99.8 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994154.1:833807-834562:+ gene-YOR289W_PE2H3 rna-NM_001183708.1_PE2H3 cds-NP_014932.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999886.1:844188-844943:+ gene-YOR289W_PE2H4 rna-NM_001183708.1_PE2H4 cds-NP_014932.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001147.6:853357-854112:+ gene-YOR289W_S288C rna-NM_001183708.1_S288C cds-NP_014932.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000006.1:263369-264124:+ gene-YOR289W_SA1 rna-NM_001183708.1_SA1 cds-NP_014932.1_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005501.1:824873-825628:+ gene-YOR289W_ThermosaccDry rna-NM_001183708.1_ThermosaccDry cds-NP_014932.1_ThermosaccDry 99.8 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005469.1:888248-889003:+ gene-YOR289W_VR1 rna-NM_001183708.1_VR1 cds-NP_014932.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000032.1:557761-558516:+ gene-YOR289W_ZTW1 rna-NM_001183708.1_ZTW1 cds-NP_014932.1_ZTW1 99.8 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047501.1:830523-831279:+ gene-YOR289W_Sparadoxus rna-NM_001183708.1_Sparadoxus cds-NP_014932.1_Sparadoxus 87.1 100.0 Unannotated 1 1 0 False False True False False

Additional files