Gene name: YOR192C-A
Reference locus (S288C): YOR192C-A
Gene biotype: protein_coding
Description: Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag
Top 10 interactors (score): Unknown
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | MBVY01000371.1:1-1236:+ | gene-YOR192C-A_Bruggeman | rna-NM_001184387.1_Bruggeman | cds-NP_058186.1_Bruggeman | 93.5 | 93.8 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000086.1:1-832:+ | gene-YOR192C-A_JAY291 | rna-NM_001184387.1_JAY291 | cds-NP_058186.1_JAY291 | 63.0 | 63.1 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | MBVX01000103.1:1746-3023:- | gene-YOR192C-A_MUCL30387 | rna-NM_001184387.1_MUCL30387 | cds-NP_058186.1_MUCL30387 | 96.6 | 97.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:708305-709621:- | gene-YOR192C-A_NCIM3186 | rna-NM_001184387.1_NCIM3186 | cds-NP_058186.1_NCIM3186 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:663869-665185:+ | gene-YOR192C-A_PE2H3 | rna-NM_001184387.1_PE2H3 | cds-NP_058186.1_PE2H3 | 96.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:851648-852964:+ | gene-YOR192C-A_PE2H4 | rna-NM_001184387.1_PE2H4 | cds-NP_058186.1_PE2H4 | 99.0 | 99.6 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:708416-709732:- | gene-YOR192C-A_S288C | rna-NM_001184387.1_S288C | cds-NP_058186.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000188.1:1-369:+ | gene-YOR192C-A_SA1 | rna-NM_001184387.1_SA1 | cds-NP_058186.1_SA1 | 28.0 | 28.0 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |