YOR161C-C (YOR161C-C)

Gene profile

Gene name: YOR161C-C
Reference locus (S288C): YOR161C-C
Gene biotype: protein_coding

Description: Uncharacterized protein YOR161C-C; Protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005309.1:636758-636903:- gene-YOR161C-C_AKU4011 rna-NM_001184625.1_AKU4011 cds-NP_878172.1_AKU4011 98.6 99.3 Mismatch 1 1 0 False False True False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000123.1:38517-38663:- gene-YOR161C-C_BG1 rna-NM_001184625.1_BG1 cds-NP_878172.1_BG1 99.3 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005517.1:620834-620980:- gene-YOR161C-C_Bruggeman rna-NM_001184625.1_Bruggeman cds-NP_878172.1_Bruggeman 98.6 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005533.1:620850-620996:- gene-YOR161C-C_CAT1 rna-NM_001184625.1_CAT1 cds-NP_878172.1_CAT1 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005373.1:619253-619398:- gene-YOR161C-C_CBS1585 rna-NM_001184625.1_CBS1585 cds-NP_878172.1_CBS1585 97.9 99.3 Mismatch 1 1 0 False False True False False
CBS436 GCA_001738355.1 Sake Asia CM005357.1:617550-617696:- gene-YOR161C-C_CBS436 rna-NM_001184625.1_CBS436 cds-NP_878172.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005341.1:616865-617010:- gene-YOR161C-C_CBS6412 rna-NM_001184625.1_CBS6412 cds-NP_878172.1_CBS6412 98.6 99.3 Mismatch 1 1 0 False False True False False
CBS6413 GCA_001738265.1 Sake Asia CM005325.1:625546-625691:- gene-YOR161C-C_CBS6413 rna-NM_001184625.1_CBS6413 cds-NP_878172.1_CBS6413 98.6 99.3 Mismatch 1 1 0 False False True False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001536.1:638880-639026:- gene-YOR161C-C_CENPK1137D rna-NM_001184625.1_CENPK1137D cds-NP_878172.1_CENPK1137D 100.0 100.0 Mismatch 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005485.1:612962-613107:- gene-YOR161C-C_EthanolRed rna-NM_001184625.1_EthanolRed cds-NP_878172.1_EthanolRed 98.6 99.3 Mismatch 1 1 0 False False True False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005549.1:617815-617960:- gene-YOR161C-C_FaliES1 rna-NM_001184625.1_FaliES1 cds-NP_878172.1_FaliES1 98.6 99.3 Mismatch 1 1 0 False False True False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000070.1:25578-25724:+ gene-YOR161C-C_JAY291 rna-NM_001184625.1_JAY291 cds-NP_878172.1_JAY291 100.0 100.0 Mismatch 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005421.1:625641-625787:- gene-YOR161C-C_MUCL30387 rna-NM_001184625.1_MUCL30387 cds-NP_878172.1_MUCL30387 98.6 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005453.1:632404-632550:- gene-YOR161C-C_MUCL30388 rna-NM_001184625.1_MUCL30388 cds-NP_878172.1_MUCL30388 98.6 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005293.1:627094-627239:- gene-YOR161C-C_MUCL39482 rna-NM_001184625.1_MUCL39482 cds-NP_878172.1_MUCL39482 97.9 99.3 Mismatch 1 1 0 False False True False False
MUCL42920 GCA_001738485.1 Bread Europe CM005437.1:636518-636664:- gene-YOR161C-C_MUCL42920 rna-NM_001184625.1_MUCL42920 cds-NP_878172.1_MUCL42920 99.3 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011824.1:639010-639156:- gene-YOR161C-C_NCIM3186 rna-NM_001184625.1_NCIM3186 cds-NP_878172.1_NCIM3186 99.3 100.0 Mismatch 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005277.1:627180-627325:- gene-YOR161C-C_NCYC1407 rna-NM_001184625.1_NCYC1407 cds-NP_878172.1_NCYC1407 98.6 99.3 Mismatch 1 1 0 False False True False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994154.1:625694-625839:- gene-YOR161C-C_PE2H3 rna-NM_001184625.1_PE2H3 cds-NP_878172.1_PE2H3 97.2 99.3 Mismatch 1 1 0 False False True False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999886.1:636071-636216:- gene-YOR161C-C_PE2H4 rna-NM_001184625.1_PE2H4 cds-NP_878172.1_PE2H4 97.2 99.3 Mismatch 1 1 0 False False True False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001147.6:639121-639267:- gene-YOR161C-C_S288C rna-NM_001184625.1_S288C cds-NP_878172.1_S288C 100.0 100.0 Mismatch 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000006.1:55680-55826:- gene-YOR161C-C_SA1 rna-NM_001184625.1_SA1 cds-NP_878172.1_SA1 100.0 100.0 Mismatch 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005501.1:616998-617143:- gene-YOR161C-C_ThermosaccDry rna-NM_001184625.1_ThermosaccDry cds-NP_878172.1_ThermosaccDry 98.6 99.3 Mismatch 1 1 0 False False True False False
VR1 GCA_001738595.1 Bioethanol South America CM005469.1:680697-680843:- gene-YOR161C-C_VR1 rna-NM_001184625.1_VR1 cds-NP_878172.1_VR1 100.0 100.0 Mismatch 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000032.1:350447-350592:- gene-YOR161C-C_ZTW1 rna-NM_001184625.1_ZTW1 cds-NP_878172.1_ZTW1 98.6 99.3 Mismatch 1 1 0 False False True False False

Additional files