YNR077C (YNR077C)


Gene profile

Gene name: YNR077C
Reference locus (S288C): YNR077C
Gene biotype: protein_coding

Description: Uncharacterized protein; UPF0320 protein YNR077C; Protein of unknown function, abundance changes with carbon source

Top 10 interactors (score): YJR162C (0.941); YNL337W (0.928); YDR543C (0.922); YKL225W (0.9); YFL063W (0.891); YAL069W (0.879); YHR217C (0.872); YBL109W (0.872); YNL338W (0.872); YMR326C (0.78); TBF1 (0.78); YEL074W (0.734); YER188C-A (0.609); YDR544C (0.607); YLL065W (0.598)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005303.1:438162-438416:- gene-YNR077C_AKU4011 rna-NM_001267862.1_AKU4011 cds-NP_001254791.1_AKU4011 91.3 100.0 Mismatch 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000151.1:386-640:- gene-YNR077C_BG1 rna-NM_001267862.1_BG1 cds-NP_001254791.1_BG1 92.1 100.0 Unannotated 1 1 0 False False False False True
Bruggeman GCA_001738585.1 Bread Not Applicable CM005505.1:1489-1743:+ gene-YNR077C_Bruggeman rna-NM_001267862.1_Bruggeman cds-NP_001254791.1_Bruggeman 93.7 99.6 Mismatch 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America MBWC01000384.1:742-996:+ gene-YNR077C_CAT1 rna-NM_001267862.1_CAT1 cds-NP_001254791.1_CAT1 96.4 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005364.1:1551-1805:+ gene-YNR077C_CBS1585 rna-NM_001267862.1_CBS1585 cds-NP_001254791.1_CBS1585 90.5 100.0 Mismatch 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia MBVR01000011.1:379-633:- gene-YNR077C_CBS436 rna-NM_001267862.1_CBS436 cds-NP_001254791.1_CBS436 95.2 100.0 Mismatch 1 1 0 False False True False False
CBS6412 GCA_001738345.1 Sake Asia CM005339.1:559-813:+ gene-YNR077C_CBS6412 rna-NM_001267862.1_CBS6412 cds-NP_001254791.1_CBS6412 90.1 100.0 Mismatch 1 1 0 False False True False False
CBS6413 GCA_001738265.1 Sake Asia CM005315.1:557783-558037:- gene-YNR077C_CBS6413 rna-NM_001267862.1_CBS6413 cds-NP_001254791.1_CBS6413 90.9 100.0 Mismatch 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001523.1:461-715:+ gene-YNR077C_CENPK1137D rna-NM_001267862.1_CENPK1137D cds-NP_001254791.1_CENPK1137D 96.8 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005480.1:56-310:+ gene-YNR077C_EthanolRed rna-NM_001267862.1_EthanolRed cds-NP_001254791.1_EthanolRed 92.6 99.2 Mismatch 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005540.1:749-1003:+ gene-YNR077C_FaliES1 rna-NM_001267862.1_FaliES1 cds-NP_001254791.1_FaliES1 91.7 99.6 Mismatch 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000336.1:1-202:+ gene-YNR077C_JAY291 rna-NM_001267862.1_JAY291 cds-NP_001254791.1_JAY291 76.4 79.2 Verified 1 1 0 False False True False False
MUCL30387 GCA_001738515.1 Bread Europe CM005409.1:1069-1323:+ gene-YNR077C_MUCL30387 rna-NM_001267862.1_MUCL30387 cds-NP_001254791.1_MUCL30387 93.7 99.6 Mismatch 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005452.1:3596-3850:+ gene-YNR077C_MUCL30388 rna-NM_001267862.1_MUCL30388 cds-NP_001254791.1_MUCL30388 91.3 100.0 Mismatch 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia MBVN01000071.1:542-796:- gene-YNR077C_MUCL39482 rna-NM_001267862.1_MUCL39482 cds-NP_001254791.1_MUCL39482 90.1 100.0 Mismatch 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe MBVV01000232.1:2588-2842:- gene-YNR077C_MUCL42920 rna-NM_001267862.1_MUCL42920 cds-NP_001254791.1_MUCL42920 94.9 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011823.1:783256-783510:- gene-YNR077C_NCIM3186 rna-NM_001267862.1_NCIM3186 cds-NP_001254791.1_NCIM3186 100.0 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia MBVM01000010.1:642-896:+ gene-YNR077C_NCYC1407 rna-NM_001267862.1_NCYC1407 cds-NP_001254791.1_NCYC1407 90.9 100.0 Mismatch 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994148.1:6526-6780:+ gene-YNR077C_PE2H3 rna-NM_001267862.1_PE2H3 cds-NP_001254791.1_PE2H3 96.4 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999882.1:2895-3149:+ gene-YNR077C_PE2H4 rna-NM_001267862.1_PE2H4 cds-NP_001254791.1_PE2H4 96.8 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001146.8:783287-783541:- gene-YNR077C_S288C rna-NM_001267862.1_S288C cds-NP_001254791.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000209.1:621-875:+ gene-YNR077C_SA1 rna-NM_001267862.1_SA1 cds-NP_001254791.1_SA1 96.8 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005487.1:519-773:+ gene-YNR077C_ThermosaccDry rna-NM_001267862.1_ThermosaccDry cds-NP_001254791.1_ThermosaccDry 90.9 100.0 Mismatch 1 1 0 False False True False False
VR1 GCA_001738595.1 Bioethanol South America CM005466.1:12496-12750:+ gene-YNR077C_VR1 rna-NM_001267862.1_VR1 cds-NP_001254791.1_VR1 96.4 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000004.1:576-830:+ gene-YNR077C_ZTW1 rna-NM_001267862.1_ZTW1 cds-NP_001254791.1_ZTW1 92.5 99.6 Mismatch 1 1 1 False True False False False

Additional files