Gene name: YNR071C
Reference locus (S288C): YNR071C
Gene biotype: protein_coding
Description: Uncharacterized isomerase YNR071C; Putative aldose 1-epimerase; Belongs to the aldose epimerase family
Top 10 interactors (score): YER187W (0.89); MIX23 (0.78); YOL014W (0.78); MIP6 (0.75); PDR18 (0.75); MAN2 (0.613); JNM1 (0.591); KGD2 (0.579); HXT17 (0.572); PDB1 (0.541); GAL3 (0.532); GAL1 (0.53); HXT13 (0.499); TPI1 (0.483); YOL075C (0.45); GAL7 (0.405)
Homologues (species, bitscore): GALM (Homo sapiens, 127.9); Galm (Mus musculus, 120.9); galm (Danio rerio, 129.4); galm (Xenopus tropicalis, 108.6); CG4988 (Drosophila melanogaster, 100.1); C01B4.6 (Caenorhabditis elegans, 85.9); AT5G15140 (Arabidopsis thaliana, 100.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:180679-181707:+ | gene-YNR071C_AKU4011 | rna-NM_001183248.1_AKU4011 | cds-NP_014469.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:662011-663039:- | gene-YNR071C_BG1 | rna-NM_001183248.1_BG1 | cds-NP_014469.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:772685-773713:- | gene-YNR071C_Bruggeman | rna-NM_001183248.1_Bruggeman | cds-NP_014469.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:808593-809621:- | gene-YNR071C_CAT1 | rna-NM_001183248.1_CAT1 | cds-NP_014469.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:759469-760497:- | gene-YNR071C_CBS1585 | rna-NM_001183248.1_CBS1585 | cds-NP_014469.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:822185-823213:- | gene-YNR071C_CBS436 | rna-NM_001183248.1_CBS436 | cds-NP_014469.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:747939-748967:- | gene-YNR071C_CBS6412 | rna-NM_001183248.1_CBS6412 | cds-NP_014469.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:749994-751022:- | gene-YNR071C_CBS6413 | rna-NM_001183248.1_CBS6413 | cds-NP_014469.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:754799-755827:- | gene-YNR071C_EthanolRed | rna-NM_001183248.1_EthanolRed | cds-NP_014469.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:746167-747195:- | gene-YNR071C_FaliES1 | rna-NM_001183248.1_FaliES1 | cds-NP_014469.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000052.1:18072-19100:- | gene-YNR071C_JAY291 | rna-NM_001183248.1_JAY291 | cds-NP_014469.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | MBVX01000004.1:292-1320:- | gene-YNR071C_MUCL30387 | rna-NM_001183248.1_MUCL30387 | cds-NP_014469.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | MBVW01000295.1:5434-6462:- | gene-YNR071C_MUCL30388 | rna-NM_001183248.1_MUCL30388 | cds-NP_014469.1_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:750798-751826:- | gene-YNR071C_MUCL39482 | rna-NM_001183248.1_MUCL39482 | cds-NP_014469.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:758205-759233:- | gene-YNR071C_MUCL42920 | rna-NM_001183248.1_MUCL42920 | cds-NP_014469.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:770409-771437:- | gene-YNR071C_NCIM3186 | rna-NM_001183248.1_NCIM3186 | cds-NP_014469.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:753383-754411:- | gene-YNR071C_NCYC1407 | rna-NM_001183248.1_NCYC1407 | cds-NP_014469.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:754876-755904:- | gene-YNR071C_PE2H3 | rna-NM_001183248.1_PE2H3 | cds-NP_014469.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:756264-757292:- | gene-YNR071C_PE2H4 | rna-NM_001183248.1_PE2H4 | cds-NP_014469.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:770440-771468:- | gene-YNR071C_S288C | rna-NM_001183248.1_S288C | cds-NP_014469.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000087.1:1206-2234:+ | gene-YNR071C_SA1 | rna-NM_001183248.1_SA1 | cds-NP_014469.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:746510-747538:- | gene-YNR071C_ThermosaccDry | rna-NM_001183248.1_ThermosaccDry | cds-NP_014469.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:789765-790793:- | gene-YNR071C_VR1 | rna-NM_001183248.1_VR1 | cds-NP_014469.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:656276-657304:- | gene-YNR071C_ZTW1 | rna-NM_001183248.1_ZTW1 | cds-NP_014469.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:760472-761500:- | gene-YNR071C_Sparadoxus | rna-NM_001183248.1_Sparadoxus | cds-NP_014469.1_Sparadoxus | 89.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |