Gene name: YNR065C
Reference locus (S288C): YNR065C
Gene biotype: protein_coding
Description: Uncharacterized membrane glycoprotein YNR065C; Protein of unknown function; protein-protein interactions suggest a possible role in actin patch formation; YNR065C is not an essential gene
Top 10 interactors (score): SRL3 (0.707); PRM5 (0.694); NCW2 (0.676); KDX1 (0.672); LSB3 (0.658); CRG1 (0.634); VPS35 (0.625); GLY1 (0.618); SGM1 (0.612); SWI3 (0.561); MYO5 (0.528); LAS17 (0.52); PEP8 (0.489); YPT7 (0.472); END3 (0.455); RVS161 (0.443); ISC1 (0.437); FBP1 (0.43); VPS29 (0.423); CHC1 (0.41)
Homologues (species, bitscore): SORL1 (Homo sapiens, 168.7); Sorl1 (Mus musculus, 172.2); sort1b (Danio rerio, 176.0); sorl1 (Xenopus tropicalis, 171.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:198445-201795:+ | gene-YNR065C_AKU4011 | rna-NM_001183242.1_AKU4011 | cds-NP_014463.1_AKU4011 | 97.1 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:641921-645271:- | gene-YNR065C_BG1 | rna-NM_001183242.1_BG1 | cds-NP_014463.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:752081-755944:- | gene-YNR065C_Bruggeman | rna-NM_001183242.1_Bruggeman | cds-NP_014463.1_Bruggeman | 86.3 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:788343-791852:- | gene-YNR065C_CAT1 | rna-NM_001183242.1_CAT1 | cds-NP_014463.1_CAT1 | 93.7 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:739243-742730:- | gene-YNR065C_CBS1585 | rna-NM_001183242.1_CBS1585 | cds-NP_014463.1_CBS1585 | 93.3 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:802095-805445:- | gene-YNR065C_CBS436 | rna-NM_001183242.1_CBS436 | cds-NP_014463.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:728225-731201:- | gene-YNR065C_CBS6412 | rna-NM_001183242.1_CBS6412 | cds-NP_014463.1_CBS6412 | 86.5 | 88.8 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:729906-733256:- | gene-YNR065C_CBS6413 | rna-NM_001183242.1_CBS6413 | cds-NP_014463.1_CBS6413 | 97.1 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:743990-747360:- | gene-YNR065C_CENPK1137D | rna-NM_001183242.1_CENPK1137D | cds-NP_014463.1_CENPK1137D | 96.6 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:734883-738056:- | gene-YNR065C_EthanolRed | rna-NM_001183242.1_EthanolRed | cds-NP_014463.1_EthanolRed | 92.0 | 94.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:726075-729424:- | gene-YNR065C_FaliES1 | rna-NM_001183242.1_FaliES1 | cds-NP_014463.1_FaliES1 | 93.8 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000005.1:1-1666:+ | gene-YNR065C_JAY291 | rna-NM_001183242.1_JAY291 | cds-NP_014463.1_JAY291 | 49.3 | 49.7 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:750040-753603:- | gene-YNR065C_MUCL30387 | rna-NM_001183242.1_MUCL30387 | cds-NP_014463.1_MUCL30387 | 93.5 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:796771-800121:- | gene-YNR065C_MUCL30388 | rna-NM_001183242.1_MUCL30388 | cds-NP_014463.1_MUCL30388 | 97.4 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:730709-734059:- | gene-YNR065C_MUCL39482 | rna-NM_001183242.1_MUCL39482 | cds-NP_014463.1_MUCL39482 | 97.2 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:737346-741457:- | gene-YNR065C_MUCL42920 | rna-NM_001183242.1_MUCL42920 | cds-NP_014463.1_MUCL42920 | 72.4 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:750319-753669:- | gene-YNR065C_NCIM3186 | rna-NM_001183242.1_NCIM3186 | cds-NP_014463.1_NCIM3186 | 98.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:733225-736645:- | gene-YNR065C_NCYC1407 | rna-NM_001183242.1_NCYC1407 | cds-NP_014463.1_NCYC1407 | 95.1 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:734770-738120:- | gene-YNR065C_PE2H3 | rna-NM_001183242.1_PE2H3 | cds-NP_014463.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:736172-739522:- | gene-YNR065C_PE2H4 | rna-NM_001183242.1_PE2H4 | cds-NP_014463.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:750350-753700:- | gene-YNR065C_S288C | rna-NM_001183242.1_S288C | cds-NP_014463.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000087.1:18977-22327:+ | gene-YNR065C_SA1 | rna-NM_001183242.1_SA1 | cds-NP_014463.1_SA1 | 96.4 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:726418-729767:- | gene-YNR065C_ThermosaccDry | rna-NM_001183242.1_ThermosaccDry | cds-NP_014463.1_ThermosaccDry | 95.0 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:769658-773008:- | gene-YNR065C_VR1 | rna-NM_001183242.1_VR1 | cds-NP_014463.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:636185-639535:- | gene-YNR065C_ZTW1 | rna-NM_001183242.1_ZTW1 | cds-NP_014463.1_ZTW1 | 97.3 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:740256-743609:- | gene-YNR065C_Sparadoxus | rna-NM_001183242.1_Sparadoxus | cds-NP_014463.1_Sparadoxus | 89.5 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |