YNR064C (YNR064C)


Gene profile

Gene name: YNR064C
Reference locus (S288C): YNR064C
Gene biotype: protein_coding

Description: Uncharacterized hydrolase YNR064C; Epoxide hydrolase; member of the alpha/beta hydrolase fold family; may have a role in detoxification of epoxides; Belongs to the DmpD/TodF/XylF esterase family

Top 10 interactors (score): Q0182 (0.746); Q0032 (0.717); YLR462W (0.692); MNC1 (0.691); YLL053C (0.682); MRPL19 (0.678); YPL067C (0.671); PHB2 (0.656); YLR053C (0.612); YHL044W (0.597); YIM1 (0.581); YFH7 (0.578); YLR179C (0.569); FSH1 (0.568); GPX2 (0.568); MRL1 (0.483); SEC21 (0.478); LCB5 (0.478); ADH4 (0.478); YMR130W (0.471)

Homologues (species, bitscore): ABHD6 (Homo sapiens, 66.6); Ephx4 (Mus musculus, 64.7); ephx2 (Danio rerio, 62.4); ephx2 (Xenopus tropicalis, 67.0); Jheh2 (Drosophila melanogaster, 53.9); C45B11.6 (Caenorhabditis elegans, 51.2); AT4G12830 (Arabidopsis thaliana, 72.0)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005307.1:202137-203009:+ gene-YNR064C_AKU4011 rna-NM_001183241.1_AKU4011 cds-NP_014462.1_AKU4011 98.8 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000155.1:640707-641579:- gene-YNR064C_BG1 rna-NM_001183241.1_BG1 cds-NP_014462.1_BG1 98.7 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005516.1:750867-751739:- gene-YNR064C_Bruggeman rna-NM_001183241.1_Bruggeman cds-NP_014462.1_Bruggeman 99.7 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005532.1:786504-787336:- gene-YNR064C_CAT1 rna-NM_001183241.1_CAT1 cds-NP_014462.1_CAT1 87.0 93.5 Unannotated 1 1 0 False False True False False
CBS1585 GCA_001738375.1 Sake Asia CM005372.1:738029-738901:- gene-YNR064C_CBS1585 rna-NM_001183241.1_CBS1585 cds-NP_014462.1_CBS1585 98.8 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005356.1:800881-801753:- gene-YNR064C_CBS436 rna-NM_001183241.1_CBS436 cds-NP_014462.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005340.1:727011-727883:- gene-YNR064C_CBS6412 rna-NM_001183241.1_CBS6412 cds-NP_014462.1_CBS6412 98.8 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005324.1:728692-729564:- gene-YNR064C_CBS6413 rna-NM_001183241.1_CBS6413 cds-NP_014462.1_CBS6413 98.8 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001535.1:742776-743648:- gene-YNR064C_CENPK1137D rna-NM_001183241.1_CENPK1137D cds-NP_014462.1_CENPK1137D 98.7 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005484.1:733669-734541:- gene-YNR064C_EthanolRed rna-NM_001183241.1_EthanolRed cds-NP_014462.1_EthanolRed 98.7 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005548.1:724861-725733:- gene-YNR064C_FaliES1 rna-NM_001183241.1_FaliES1 cds-NP_014462.1_FaliES1 98.7 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000005.1:2008-2880:+ gene-YNR064C_JAY291 rna-NM_001183241.1_JAY291 cds-NP_014462.1_JAY291 99.8 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005420.1:748826-749698:- gene-YNR064C_MUCL30387 rna-NM_001183241.1_MUCL30387 cds-NP_014462.1_MUCL30387 99.7 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005452.1:790433-791305:- gene-YNR064C_MUCL30388 rna-NM_001183241.1_MUCL30388 cds-NP_014462.1_MUCL30388 99.6 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005292.1:729495-730367:- gene-YNR064C_MUCL39482 rna-NM_001183241.1_MUCL39482 cds-NP_014462.1_MUCL39482 98.8 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005436.1:736132-737004:- gene-YNR064C_MUCL42920 rna-NM_001183241.1_MUCL42920 cds-NP_014462.1_MUCL42920 99.5 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011823.1:749105-749977:- gene-YNR064C_NCIM3186 rna-NM_001183241.1_NCIM3186 cds-NP_014462.1_NCIM3186 98.5 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005276.1:732011-732883:- gene-YNR064C_NCYC1407 rna-NM_001183241.1_NCYC1407 cds-NP_014462.1_NCYC1407 98.8 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994153.1:733556-734428:- gene-YNR064C_PE2H3 rna-NM_001183241.1_PE2H3 cds-NP_014462.1_PE2H3 99.8 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999885.1:734958-735830:- gene-YNR064C_PE2H4 rna-NM_001183241.1_PE2H4 cds-NP_014462.1_PE2H4 99.8 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001146.8:749136-750008:- gene-YNR064C_S288C rna-NM_001183241.1_S288C cds-NP_014462.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000087.1:22669-23541:+ gene-YNR064C_SA1 rna-NM_001183241.1_SA1 cds-NP_014462.1_SA1 98.8 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005500.1:725204-726076:- gene-YNR064C_ThermosaccDry rna-NM_001183241.1_ThermosaccDry cds-NP_014462.1_ThermosaccDry 98.7 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005468.1:768444-769316:- gene-YNR064C_VR1 rna-NM_001183241.1_VR1 cds-NP_014462.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000030.1:634971-635843:- gene-YNR064C_ZTW1 rna-NM_001183241.1_ZTW1 cds-NP_014462.1_ZTW1 98.7 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047500.1:739040-739912:- gene-YNR064C_Sparadoxus rna-NM_001183241.1_Sparadoxus cds-NP_014462.1_Sparadoxus 93.2 100.0 Verified 1 1 0 False False False True False

Additional files