Gene name: YNR029C
Reference locus (S288C): YNR029C
Gene biotype: protein_coding
Description: Uncharacterized protein YNR029C; Putative protein of unknown function; deletion confers reduced fitness in saline
Top 10 interactors (score): MAP1 (0.979); NST1 (0.716); VHC1 (0.693); QCR8 (0.689); YJL193W (0.674); RAD57 (0.664); HIS4 (0.636); SPG5 (0.613); FOL2 (0.583); SIP5 (0.573); MCH4 (0.572); BIO4 (0.551); SSL1 (0.55); RIP1 (0.547); HEM2 (0.529); CKB1 (0.52); HIS5 (0.511); CDC36 (0.495); UGA1 (0.485); ORM2 (0.481)
Homologues (species, bitscore): CBWD1 (Homo sapiens, 231.1); Cbwd1 (Mus musculus, 234.6); cbwd (Danio rerio, 208.4); cbwd2 (Xenopus tropicalis, 222.2); AT1G26520 (Arabidopsis thaliana, 184.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:660849-662138:- | gene-YNR029C_AKU4011 | rna-NM_001183206.3_AKU4011 | cds-NP_014426.3_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:568713-570002:- | gene-YNR029C_BG1 | rna-NM_001183206.3_BG1 | cds-NP_014426.3_BG1 | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:678302-679591:- | gene-YNR029C_Bruggeman | rna-NM_001183206.3_Bruggeman | cds-NP_014426.3_Bruggeman | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:712558-713847:- | gene-YNR029C_CAT1 | rna-NM_001183206.3_CAT1 | cds-NP_014426.3_CAT1 | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:666604-667893:- | gene-YNR029C_CBS1585 | rna-NM_001183206.3_CBS1585 | cds-NP_014426.3_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:728272-729561:- | gene-YNR029C_CBS436 | rna-NM_001183206.3_CBS436 | cds-NP_014426.3_CBS436 | 98.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:655792-657081:- | gene-YNR029C_CBS6412 | rna-NM_001183206.3_CBS6412 | cds-NP_014426.3_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:657497-658786:- | gene-YNR029C_CBS6413 | rna-NM_001183206.3_CBS6413 | cds-NP_014426.3_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:670952-672241:- | gene-YNR029C_CENPK1137D | rna-NM_001183206.3_CENPK1137D | cds-NP_014426.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:662541-663830:- | gene-YNR029C_EthanolRed | rna-NM_001183206.3_EthanolRed | cds-NP_014426.3_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:653744-655033:- | gene-YNR029C_FaliES1 | rna-NM_001183206.3_FaliES1 | cds-NP_014426.3_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000037.1:47748-49037:+ | gene-YNR029C_JAY291 | rna-NM_001183206.3_JAY291 | cds-NP_014426.3_JAY291 | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:676059-677348:- | gene-YNR029C_MUCL30387 | rna-NM_001183206.3_MUCL30387 | cds-NP_014426.3_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:716882-718171:- | gene-YNR029C_MUCL30388 | rna-NM_001183206.3_MUCL30388 | cds-NP_014426.3_MUCL30388 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:658104-659393:- | gene-YNR029C_MUCL39482 | rna-NM_001183206.3_MUCL39482 | cds-NP_014426.3_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:662276-663565:- | gene-YNR029C_MUCL42920 | rna-NM_001183206.3_MUCL42920 | cds-NP_014426.3_MUCL42920 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:677168-678457:- | gene-YNR029C_NCIM3186 | rna-NM_001183206.3_NCIM3186 | cds-NP_014426.3_NCIM3186 | 98.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:660612-661901:- | gene-YNR029C_NCYC1407 | rna-NM_001183206.3_NCYC1407 | cds-NP_014426.3_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:661703-662992:- | gene-YNR029C_PE2H3 | rna-NM_001183206.3_PE2H3 | cds-NP_014426.3_PE2H3 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:663021-664310:- | gene-YNR029C_PE2H4 | rna-NM_001183206.3_PE2H4 | cds-NP_014426.3_PE2H4 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:677199-678488:- | gene-YNR029C_S288C | rna-NM_001183206.3_S288C | cds-NP_014426.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000074.1:47898-49187:+ | gene-YNR029C_SA1 | rna-NM_001183206.3_SA1 | cds-NP_014426.3_SA1 | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:654081-655370:- | gene-YNR029C_ThermosaccDry | rna-NM_001183206.3_ThermosaccDry | cds-NP_014426.3_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:696078-697367:- | gene-YNR029C_VR1 | rna-NM_001183206.3_VR1 | cds-NP_014426.3_VR1 | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:563492-564781:- | gene-YNR029C_ZTW1 | rna-NM_001183206.3_ZTW1 | cds-NP_014426.3_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:668175-669464:- | gene-YNR029C_Sparadoxus | rna-NM_001183206.3_Sparadoxus | cds-NP_014426.3_Sparadoxus | 89.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |