YNL234W (YNL234W)


Gene profile

Gene name: YNL234W
Reference locus (S288C): YNL234W
Gene biotype: protein_coding

Description: Uncharacterized globin-like protein YNL234W; Protein of unknown function with similarity to globins; has a functional heme-binding domain; mutant has aneuploidy tolerance; transcription induced by stress conditions; may be involved in glucose signaling or metabolism; regulated by Rgt1

Top 10 interactors (score): YKR075C (0.861); YOR338W (0.835); YLR407W (0.779); YOR062C (0.747); RIE1 (0.725); TAD2 (0.713); SPH1 (0.711); HPM1 (0.697); SAY1 (0.695); IOC2 (0.694); ARI1 (0.674); HXT8 (0.671); PEX31 (0.616); YGL235W (0.597); SCS7 (0.592); HEM13 (0.578); TNA1 (0.575); RGT1 (0.572); MSH1 (0.568); YIL152W (0.567)

Homologues (species, bitscore): NGB (Homo sapiens, 53.9); Ngb (Mus musculus, 50.4); ngb (Danio rerio, 56.6)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005308.1:204012-205292:+ gene-YNL234W_AKU4011 rna-NM_001183072.1_AKU4011 cds-NP_014165.1_AKU4011 99.5 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000155.1:107958-109238:+ gene-YNL234W_BG1 rna-NM_001183072.1_BG1 cds-NP_014165.1_BG1 99.2 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005516.1:214063-215343:+ gene-YNL234W_Bruggeman rna-NM_001183072.1_Bruggeman cds-NP_014165.1_Bruggeman 99.5 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005532.1:221216-222496:+ gene-YNL234W_CAT1 rna-NM_001183072.1_CAT1 cds-NP_014165.1_CAT1 99.2 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005372.1:204409-205689:+ gene-YNL234W_CBS1585 rna-NM_001183072.1_CBS1585 cds-NP_014165.1_CBS1585 99.4 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005356.1:199498-200778:+ gene-YNL234W_CBS436 rna-NM_001183072.1_CBS436 cds-NP_014165.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005340.1:200443-201723:+ gene-YNL234W_CBS6412 rna-NM_001183072.1_CBS6412 cds-NP_014165.1_CBS6412 99.2 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005324.1:201091-202371:+ gene-YNL234W_CBS6413 rna-NM_001183072.1_CBS6413 cds-NP_014165.1_CBS6413 99.5 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001535.1:204044-205324:+ gene-YNL234W_CENPK1137D rna-NM_001183072.1_CENPK1137D cds-NP_014165.1_CENPK1137D 99.4 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005484.1:201661-202941:+ gene-YNL234W_EthanolRed rna-NM_001183072.1_EthanolRed cds-NP_014165.1_EthanolRed 99.3 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005548.1:196403-197683:+ gene-YNL234W_FaliES1 rna-NM_001183072.1_FaliES1 cds-NP_014165.1_FaliES1 99.3 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000082.1:107546-108826:+ gene-YNL234W_JAY291 rna-NM_001183072.1_JAY291 cds-NP_014165.1_JAY291 99.2 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005420.1:209597-210877:+ gene-YNL234W_MUCL30387 rna-NM_001183072.1_MUCL30387 cds-NP_014165.1_MUCL30387 99.4 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005452.1:208182-209462:+ gene-YNL234W_MUCL30388 rna-NM_001183072.1_MUCL30388 cds-NP_014165.1_MUCL30388 99.2 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005292.1:201899-203179:+ gene-YNL234W_MUCL39482 rna-NM_001183072.1_MUCL39482 cds-NP_014165.1_MUCL39482 99.4 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005436.1:204154-205434:+ gene-YNL234W_MUCL42920 rna-NM_001183072.1_MUCL42920 cds-NP_014165.1_MUCL42920 99.3 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011823.1:210202-211482:+ gene-YNL234W_NCIM3186 rna-NM_001183072.1_NCIM3186 cds-NP_014165.1_NCIM3186 99.2 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005276.1:203989-205269:+ gene-YNL234W_NCYC1407 rna-NM_001183072.1_NCYC1407 cds-NP_014165.1_NCYC1407 99.2 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994153.1:200889-202169:+ gene-YNL234W_PE2H3 rna-NM_001183072.1_PE2H3 cds-NP_014165.1_PE2H3 99.2 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999885.1:200277-201557:+ gene-YNL234W_PE2H4 rna-NM_001183072.1_PE2H4 cds-NP_014165.1_PE2H4 99.2 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001146.8:210233-211513:+ gene-YNL234W_S288C rna-NM_001183072.1_S288C cds-NP_014165.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000040.1:40787-42067:- gene-YNL234W_SA1 rna-NM_001183072.1_SA1 cds-NP_014165.1_SA1 99.9 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005500.1:197259-198539:+ gene-YNL234W_ThermosaccDry rna-NM_001183072.1_ThermosaccDry cds-NP_014165.1_ThermosaccDry 99.3 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005468.1:216246-217526:+ gene-YNL234W_VR1 rna-NM_001183072.1_VR1 cds-NP_014165.1_VR1 99.2 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000030.1:107578-108858:+ gene-YNL234W_ZTW1 rna-NM_001183072.1_ZTW1 cds-NP_014165.1_ZTW1 99.3 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047500.1:207588-208868:+ gene-YNL234W_Sparadoxus rna-NM_001183072.1_Sparadoxus cds-NP_014165.1_Sparadoxus 86.9 99.9 Verified 1 1 1 False True False False False

Additional files