YNL190W (YNL190W)


Gene profile

Gene name: YNL190W
Reference locus (S288C): YNL190W
Gene biotype: protein_coding

Description: Hydrophilin essential in desiccation-rehydration process; cell wall protein; contains a putative GPI-attachment site; Belongs to the PGA14 family

Top 10 interactors (score): YPL025C (0.892); YJL144W (0.763); YBR016W (0.747); YML094C-A (0.747); TIF11 (0.746); NOP6 (0.746); PRY3 (0.746); STF2 (0.744); SIP18 (0.697); WSC3 (0.676); GRE1 (0.651); YOR387C (0.619); INH1 (0.617); SWC7 (0.574); YGR122W (0.573); WWM1 (0.572); GPI13 (0.568); GON7 (0.568); HSP150 (0.523); ARP8 (0.499)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005308.1:276163-276777:+ gene-YNL190W_AKU4011 rna-NM_001183028.1_AKU4011 cds-NP_014209.1_AKU4011 98.5 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000155.1:180116-180730:+ gene-YNL190W_BG1 rna-NM_001183028.1_BG1 cds-NP_014209.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005516.1:286219-286833:+ gene-YNL190W_Bruggeman rna-NM_001183028.1_Bruggeman cds-NP_014209.1_Bruggeman 100.0 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005532.1:328463-329077:+ gene-YNL190W_CAT1 rna-NM_001183028.1_CAT1 cds-NP_014209.1_CAT1 98.8 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005372.1:276817-277431:+ gene-YNL190W_CBS1585 rna-NM_001183028.1_CBS1585 cds-NP_014209.1_CBS1585 98.8 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005356.1:345103-345717:+ gene-YNL190W_CBS436 rna-NM_001183028.1_CBS436 cds-NP_014209.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005340.1:272220-272834:+ gene-YNL190W_CBS6412 rna-NM_001183028.1_CBS6412 cds-NP_014209.1_CBS6412 98.6 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005324.1:273250-273864:+ gene-YNL190W_CBS6413 rna-NM_001183028.1_CBS6413 cds-NP_014209.1_CBS6413 98.8 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001535.1:276243-276857:+ gene-YNL190W_CENPK1137D rna-NM_001183028.1_CENPK1137D cds-NP_014209.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005484.1:273149-273763:+ gene-YNL190W_EthanolRed rna-NM_001183028.1_EthanolRed cds-NP_014209.1_EthanolRed 98.6 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005548.1:269062-269676:+ gene-YNL190W_FaliES1 rna-NM_001183028.1_FaliES1 cds-NP_014209.1_FaliES1 98.6 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000260.1:48878-49312:- gene-YNL190W_JAY291 rna-NM_001183028.1_JAY291 cds-NP_014209.1_JAY291 70.5 70.7 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005420.1:282010-282624:+ gene-YNL190W_MUCL30387 rna-NM_001183028.1_MUCL30387 cds-NP_014209.1_MUCL30387 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005452.1:316371-316967:+ gene-YNL190W_MUCL30388 rna-NM_001183028.1_MUCL30388 cds-NP_014209.1_MUCL30388 97.0 97.0 Mismatch 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005292.1:274056-274670:+ gene-YNL190W_MUCL39482 rna-NM_001183028.1_MUCL39482 cds-NP_014209.1_MUCL39482 98.8 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005436.1:276422-277036:+ gene-YNL190W_MUCL42920 rna-NM_001183028.1_MUCL42920 cds-NP_014209.1_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011823.1:282364-282978:+ gene-YNL190W_NCIM3186 rna-NM_001183028.1_NCIM3186 cds-NP_014209.1_NCIM3186 99.5 100.0 Mismatch 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005276.1:276150-276764:+ gene-YNL190W_NCYC1407 rna-NM_001183028.1_NCYC1407 cds-NP_014209.1_NCYC1407 98.6 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994153.1:273058-273672:+ gene-YNL190W_PE2H3 rna-NM_001183028.1_PE2H3 cds-NP_014209.1_PE2H3 98.8 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999885.1:272446-273060:+ gene-YNL190W_PE2H4 rna-NM_001183028.1_PE2H4 cds-NP_014209.1_PE2H4 98.8 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001146.8:282395-283009:+ gene-YNL190W_S288C rna-NM_001183028.1_S288C cds-NP_014209.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000018.1:130591-131205:- gene-YNL190W_SA1 rna-NM_001183028.1_SA1 cds-NP_014209.1_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005500.1:269919-270533:+ gene-YNL190W_ThermosaccDry rna-NM_001183028.1_ThermosaccDry cds-NP_014209.1_ThermosaccDry 98.6 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005468.1:288412-288998:+ gene-YNL190W_VR1 rna-NM_001183028.1_VR1 cds-NP_014209.1_VR1 95.1 95.4 Unannotated 1 1 0 False False False True False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000030.1:179746-180360:+ gene-YNL190W_ZTW1 rna-NM_001183028.1_ZTW1 cds-NP_014209.1_ZTW1 98.8 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047500.1:280396-281010:+ gene-YNL190W_Sparadoxus rna-NM_001183028.1_Sparadoxus cds-NP_014209.1_Sparadoxus 93.6 100.0 Verified 1 1 1 False True False False False

Additional files